Rhizobium etli bv. mimosae Mim1: REMIM1_CH04098
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Entry
REMIM1_CH04098 CDS
T02778
Name
(GenBank) LuxR family transcriptional regulator protein
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel02020
Two-component system
rel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
REMIM1_CH04098
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
REMIM1_CH04098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rel03000
]
REMIM1_CH04098
Transcription factors [BR:
rel03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
REMIM1_CH04098
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGS23808
UniProt:
S5S0Z5
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Position
4115668..4116423
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AA seq
251 aa
AA seq
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MNINSLIQLLVVLEECPNPDAVVAELEQVLHGSGFEYYGLLRHLQQNPAQQNIELRAAPL
AGRWPEQWLQIYAAKKYVRIDPMVRYLAHAQRPFRWRESMAAFDGDAHQRRMEQMMVDAF
GHGLEDGYLFPIHGRNGILGSLTLGGRPIDLSPVEIALLEAVARKSFWRLLDLTGEAEAL
ETVLPTETPLTRREMEILHYLAEGMTSMEISKMLKISNHTVDWYMNGLQDKLKAKNRQQA
VALAFRHGLIS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattaattctttaattcaattgcttgtagttctggaagagtgcccaaatccggac
gccgtcgtcgccgaactcgagcaggtcctccacggttccggtttcgagtattacggtctg
ctgcgacatttgcagcaaaacccggcgcagcagaatatcgaactgcgcgccgcgccgctt
gccggccgctggccggaacaatggctacagatatatgccgcaaaaaaatatgtccggatc
gatccgatggtgcgttatctcgcgcatgcgcaacggcctttccgctggcgggagagcatg
gcagccttcgacggtgacgcgcatcagcgccgcatggagcagatgatggtcgatgccttc
ggccacggattggaggacggctatctctttccgattcatgggcgcaacggcattctcggc
agcctcaccctcggcggcagaccaatcgacttgtcgccggtggaaatcgcgctgctcgag
gccgtggcgcgcaagagcttctggcgattgctcgacctcacaggcgaggctgaggcgctg
gaaacggtgctgccgaccgagacgccgctgacgcggcgcgagatggaaatcctccactat
ctcgccgaaggcatgacgtcgatggagatcagcaagatgctgaagatctcaaatcatacc
gtcgactggtacatgaacggtctgcaggacaagctgaaggcgaaaaacaggcagcaggca
gtggcgcttgccttccgtcacggtctgataagctag
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