Rhizobium etli bv. mimosae Mim1: REMIM1_PA00004
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Entry
REMIM1_PA00004 CDS
T02778
Name
(GenBank) O-antigen ligase-related protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00540
Lipopolysaccharide biosynthesis
rel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
REMIM1_PA00004
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rel01005
]
REMIM1_PA00004
Enzymes [BR:
rel01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
REMIM1_PA00004
Lipopolysaccharide biosynthesis proteins [BR:
rel01005
]
Core region
REMIM1_PA00004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
DUF6773
DUF6223
Motif
Other DBs
NCBI-ProteinID:
AGS23956
UniProt:
S5S938
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All DBs
Position
pRetMIM1a:complement(2994..4268)
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AA seq
424 aa
AA seq
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MNYFRQLVIAVLHPGNWSGSALDRSNGIAVFLFAILPGLSPNFNSFILLGSMLSGLYCLA
RARFPLNLSKSDRVVAICMTIYPVVMIVSIFVNPPFSEELDWIFRLLPFFSIWLILPRMR
QSPDGRLVPLFILGAGLGMIVTFLFSLLQVLFLMPRAEAGTSNAALLGVIGVLFGGVALL
NIQSPKSMEQKIAILGYAAGLGSALLSGTRSAWLVIPVHLVIFLWYFPKNRFHVSLRSLA
ITGSVLLLGLLALGSDQVVYRVRELQDNLSSLESTNGDITSLSARVALYKGALSAIVKDP
FTGYGPQNRMAAVLAEVPESLRPQLPYSHVHNGFLTAGIDAGLVGIAALSLLLLTPVIGA
WKKESGPGRDLAMALALLLTSSYIITGSFGIMFNQKALDPIFAYMVALICADRGSTRYAP
VVRS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgaattatttcaggcaactcgtgattgcggtgctccatcccgggaactggtctggaagc
gcgcttgatcgatccaatggcattgcggtctttctctttgcaatcctgcccgggctttcg
cctaatttcaactccttcatcctcctcgggtcgatgctatccggcctctattgtctggca
agggcccgatttcctctgaacctgtcgaagtccgaccgggtggttgccatttgtatgacg
atttacccggtggtgatgatcgtcagcatattcgtcaatccgcctttctcggaagaactg
gattggattttccggctcctgccgttcttttcgatctggctgattttgccgcgcatgcgt
caatctcccgatggccgccttgtgccgctctttattctcggcgcgggtctcggcatgatc
gttacttttcttttcagtctgcttcaggtcctgttcctgatgcccagggccgaggcggga
acctcgaacgcggcgctgctgggcgttatcggcgtgcttttcggcggcgtcgcgcttctc
aatattcaatctcccaaaagcatggagcaaaagatcgcgatattgggatatgccgccggt
ctcggcagcgcgctactttccggaacgcgctcggcctggctggtcatccccgttcacctc
gtcattttcctctggtattttcccaaaaaccgttttcatgtcagtctgcgcagcctcgcc
atcaccggctcggtattgctgctgggacttctcgccttgggcagcgaccaggttgtctat
cgcgtccgtgaactccaggacaatctgtcatcgctcgaaagcaccaatggtgatatcacg
tcgctgagcgcccgtgttgccctctacaagggtgccctatccgcgatcgtcaaggacccg
ttcaccggctatggcccgcagaaccggatggctgctgtcctggcagaagtccctgagagc
ctgaggccgcaactgccctattcccatgtccataacggctttctcacagcgggaatcgac
gccggccttgtcggtatcgcagcgctttcgctgctgctcctgacgcccgtcatcggtgcg
tggaaaaaggaatctggccctggccgggatctagccatggcgctcgctctcttgctcacc
agcagctacattataaccggcagtttcggtatcatgttcaaccaaaaagcgctggatccg
atattcgcctatatggtcgctcttatttgcgcggaccggggcagtacacgctatgcacct
gtggttcgaagctga
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