Rhizobium etli bv. mimosae Mim1: REMIM1_PF00020
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Entry
REMIM1_PF00020 CDS
T02778
Symbol
mdeA
Name
(GenBank) methionine gamma-lyase
KO
K01761
methionine-gamma-lyase [EC:
4.4.1.11
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00270
Cysteine and methionine metabolism
rel00450
Selenocompound metabolism
rel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
REMIM1_PF00020 (mdeA)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
REMIM1_PF00020 (mdeA)
Enzymes [BR:
rel01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.11 methionine gamma-lyase
REMIM1_PF00020 (mdeA)
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AGS25692
UniProt:
S5SUW6
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Position
pRetMIM1f:complement(18150..19433)
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AA seq
427 aa
AA seq
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MTAPHPSKTHIGNHALHPETQMLNYGYDPELSEGAVKPPVFLTSTFVFNSAEDGRDFFDY
VSGRREPPAGKGAGLVYSRFNHPNSEIVEDRLAVYERTESGALFSSGMAAIATTLFAFVR
PGDAILHSQPLYGGTETLLAKTFLNFGVAAVGFADGVSEASVQKAADEAVGKGRVSVILI
ETPANPTNSLVDVAMIRRVADAIGARQGHVPVVVCDNTLLGPVFQRPIEHGADISLYSLT
KYVGGHSDLIAGAVLGRKAVIKQVKALRGAIGTQLDPHSCWMLGRSLETLQLRMERANSN
ARAVADFLRDHPKVEKVHYLPYHDPDSPSGRTFAAQCSGAGSTFSFDIRGGQPASFKFLN
ALQVFKLAVSLGGTESLASHPAAMTHSGVPADVRERIGVLESTIRLSIGIEHPDDLIADL
ELALQAV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccccgcatccctccaaaacccatatcggcaatcatgcgctgcatcccgaaacg
cagatgctgaactacggctacgatccggaactttccgaaggggcggtcaagccgccggtg
tttctgacctcaaccttcgtgttcaattccgccgaggatggtagggatttcttcgattat
gtgtccggccgtcgcgagccgccggcgggcaagggcgccggcctcgtctattcccgcttc
aatcatccgaatagcgagatcgtcgaagacaggctcgccgtctacgaacggacggaaagc
ggcgcgctcttctcttccggcatggcggcgatcgccacgaccctgttcgcctttgtccgg
ccaggggatgcgatcctgcattcgcagccgctctatggcggcaccgaaaccctgctggcg
aagaccttcctcaatttcggcgtcgccgcggtcggctttgccgatggcgtcagcgaggca
tcggtgcagaaggcggcggatgaggcggtcggcaagggtcgcgtttccgtcatcctcatc
gagacgccggccaacccgaccaacagcctcgtcgacgtcgcgatgatccggcgcgtggcc
gatgcgatcggcgcaaggcaggggcatgtgcctgtcgtcgtctgcgacaatacgctgctc
gggccggtcttccagcggccgatcgagcatggcgctgatatctcgctttattcgctgacc
aaatatgtcggcggccattccgatctgatcgccggcgccgtcctcgggcgcaaggctgtc
atcaagcaggtcaaggcgctgcgcggcgcgatcggcacgcagctcgatccgcattcctgc
tggatgctcggccggtcgctcgaaacgctgcagctacgcatggagcgggccaacagcaat
gcgcgggcggtggccgatttcctgcgtgatcatccgaaggtcgagaaggttcattatctt
ccctatcacgatccggactcgccctccggccgcaccttcgccgcccaatgcagcggcgcc
ggctcgaccttctccttcgatatccgcggcggccagccggcctccttcaaattcctgaat
gcactgcaggtcttcaagctcgccgtcagcctcggcggcacggaatcgctggcgagccac
cccgccgccatgacgcattccggcgtgccggccgatgtcagggagcgcatcggcgtgctg
gaatcgacaatccggctgtctatcggcatcgagcatccggatgatttaatcgccgatctg
gagctggcgctgcaggctgtttga
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