Rhizobium etli bv. phaseoli IE4803: IE4803_CH01046
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Entry
IE4803_CH01046 CDS
T03667
Symbol
prtD-2
Name
(GenBank) protease secretion system ABC transporter ATP-binding protein PrtD 2
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Pathway
rep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IE4803_CH01046 (prtD-2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rep02000
]
IE4803_CH01046 (prtD-2)
02044 Secretion system [BR:
rep02044
]
IE4803_CH01046 (prtD-2)
Transporters [BR:
rep02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
IE4803_CH01046 (prtD-2)
Secretion system [BR:
rep02044
]
Type I secretion system
Multiple protein transporter
IE4803_CH01046 (prtD-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
TB2_DP1_HVA22
nSTAND1
AAA_29
AAA_30
NACHT
AAA_21
DUF87
Motif
Other DBs
NCBI-ProteinID:
AJC78288
LinkDB
All DBs
Position
complement(1070540..1072291)
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AA seq
583 aa
AA seq
DB search
MFAFLNLSVFGGLVAASFVINLLALTSPLFMLQIYDRVLASGSVPTLVGLGVLALWLYGF
QAALDILRQRILLRIGERFDRELSDRVHAAVTRLPLIARMPGDGLQPLRDLDNVRGFLSG
AGPTALFDLPWIPLYLAICFIFHFWLGMTALAGAIVLVSLTLLTNMLSQKVIKEATAHNI
ARNGLMEAARRNAEVVHAMGLSRRIGARWQKANSDYLKANRRAGDVTGGLGGLAKALRAI
LQSTMLGVGAWLVIDQVATPGVMIAASIMMGRALAPVDLAIANWKPFLMARQSWARLQEM
LKTVPEQPSALPLPKPVRELRAEELTIIPPGERRPNVAGVGFVMQRGTALGIIGPSGSGK
SSLARVLVGAWAPAAGNVRLDGASLDHWDKEALGRHIGYLPQGVELFDGTIAENIARFEE
DPDPEAIVAAAKAAGACELILSFGKGYETRIGEGGSALSAGQRQRIGIARALYGDPFLVV
MDEPNANLDAEGEAAVVRAIVSVRERGGIAIVVAHRPSAISVCDKVLMMEGGRQRAFGPK
DEVLSKVLQVAPAPASAARGRAEAGNRLQTNTARRLHGTLETK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctttcctgaacctcagcgttttcggcggtcttgttgccgcgagcttcgtcatc
aacttgctggcgctgacctcgccgctgttcatgctgcagatctacgaccgggttctggcg
agcggaagcgttccgacgctggtcggcctcggtgttctcgcgctctggctttacggtttt
caggcggcgctcgacatccttcgccagcgcatcctgctgcgcatcggcgagcgcttcgac
cgggagctttccgaccgggtgcatgcggcggtgacgcgcctgccgctcatcgcccgcatg
cccggcgacggcctgcagccgctgcgcgatctcgataatgtgcgcggtttcctgtcgggc
gccggcccgacggcgctcttcgaccttccctggatcccgctctatctcgccatctgcttc
atcttccatttctggctcggcatgacggcgcttgccggggcgatcgtgctggtgtcgctg
acgctgctgacgaacatgctttcgcagaaggtaatcaaggaggcgacggcccacaacatt
gcccgcaacgggctgatggaagccgctcgccgcaatgctgaggtcgtccatgcgatgggt
ctttcgcgccggatcggcgcgcgctggcagaaagccaattccgattatctcaaggcgaac
cgccgggcgggcgatgtcacgggcggccttggcggccttgccaaggcgctgcgcgccatc
ctgcaatcaacgatgctcggcgttggcgcatggctggtcatcgatcaggtcgcgacgccc
ggcgtgatgatcgccgcttcgatcatgatgggccgtgcgcttgctccggtcgatctcgcc
attgccaactggaagcccttccttatggcgcggcagagctgggcccggctgcaggagatg
ctgaagacggtgccggaacagccgagcgccttgccgctgccgaagccggtgcgggaactg
cgcgccgaagagctcaccatcattcctccgggcgaacgcaggccgaatgtcgccggcgtc
ggctttgtcatgcagcgcggaaccgcactcggcatcatcgggccgtccggctccggcaag
tcgagcctcgcaagggtgctggtcggggcatgggcgccggcggccgggaatgtccgcctt
gacggggcgagcctcgaccattgggacaaggaggcgcttggccggcatatcggatatctg
ccgcagggcgtcgaactgttcgacggcacgatcgccgagaacatcgcccgcttcgaggag
gatcccgatccggaggcgatcgtggcagcggcgaaagcggcgggcgcgtgcgaattgatc
ctttccttcggcaaaggctatgagacccgcatcggcgaaggcggctcagcgctgtcggcc
ggtcagcgccagcgtatcggcatcgcccgggcgctttatggcgatcccttcctcgtggtg
atggacgagccgaacgccaacctcgacgccgagggcgaagcagccgtggtcagggccatc
gtctcggtgcgcgagcgcggcggcatcgcgatcgtcgtcgcgcaccggccgagcgcgatc
agcgtctgcgacaaggtgctgatgatggagggcggccgccagcgcgccttcggtccgaaa
gacgaggtgctgtccaaggttctgcaggtggctcctgctccggcctccgcggcaaggggc
cgtgcagaggcaggaaacaggctccagacgaatacggcgcgcagactgcatggaacgctt
gaaacaaaatga
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