Rhodococcus erythropolis PR4: RER_54940
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Entry
RER_54940 CDS
T00881
Name
(GenBank) putative fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00061
Fatty acid biosynthesis
rer00071
Fatty acid degradation
rer01100
Metabolic pathways
rer01212
Fatty acid metabolism
rer02024
Quorum sensing
Module
rer_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RER_54940
00071 Fatty acid degradation
RER_54940
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RER_54940
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rer01004
]
RER_54940
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rer04147
]
RER_54940
Enzymes [BR:
rer01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RER_54940
Lipid biosynthesis proteins [BR:
rer01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RER_54940
Exosome [BR:
rer04147
]
Exosomal proteins
Exosomal proteins of breast milk
RER_54940
Exosomal proteins of breast cancer cells
RER_54940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Big_6
Motif
Other DBs
NCBI-ProteinID:
BAH36202
NITE:
RER_54940
UniProt:
C0ZSL0
LinkDB
All DBs
Position
5939785..5941305
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AA seq
506 aa
AA seq
DB search
MASVLDPVTRHAEVTPDNIAIRNSTAIRGTDEHWTYRQLHDASLAFAGRIRDAGLSVGDR
VLLAAPSVAEFVVAYMGIQAAGCVVVPINTMSAQPEVEYVLDDAEISLAIAWHQLGPAVQ
DAGSARGVPVWTLTEESAKADHAPATVVDRDAADTTAILYTSGTTGRPKGAQLTVGNLLS
AGEIGAESSRGNPSDRTGTGLPLFHIFGQGSVMMATFTGGGSLSLLARFDPAAMLDLVRR
DKLTIMAGVPTMWNAMLHAAADVDSSDFEQLRIAISGGASLPGEVARAFEARFNCTILEG
YGLTETSAFGTFNSIDRVAKIGYTGRAVPRTEVEVRDHDGNVCEAGTVGEVFIKGPTVMK
GYWKRPEDTAAVLSNDGWFRTGDLGETDPDGDLRIVDRVKDLIIRGGYNVYPGEVEEVLY
QHPDIIEAAVIGIPDDYYGEEVAAVVAVRPGSDLEADAVTSWARERLSAYKIPRVVQFID
ALPKGSTGKILKRSIDRTELLAQKQN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgttctcgacccggtgacccgtcacgcggaagtcactccggacaacatcgca
attcgaaacagcactgcgatccgcggcacggatgaacactggacttaccggcagctccac
gacgcatccctggcgttcgccggccgcattcgcgatgccgggttgagcgtaggcgatcgg
gttctcctagcggcgccgtcggtagcggaattcgtcgtggcgtacatgggaattcaggcc
gcaggttgtgtcgtggtaccgatcaacacgatgtcggcgcaacccgaagtcgagtacgtt
ctggacgacgcggagatttccctggccatcgcgtggcatcaactcggtcccgcagtccag
gatgcagggagtgcgcgcggtgtcccggtgtggacactcaccgaagaatcggcgaaggcc
gatcatgcacccgcaactgtggtcgaccgtgacgcagcagacacaacggcgattctctac
acctccggcaccaccggacgcccgaagggcgctcagctgaccgtcgggaatttgttgtcc
gccggtgagatcggcgccgagagcagccgcggaaacccatcggaccgcaccggaaccgga
ctgccgctctttcacatcttcggccagggttcggtcatgatggcaaccttcaccggcggc
ggatcactgtccctgctcgcccggttcgaccccgctgccatgctcgacctggtccgccgg
gacaagctcaccatcatggccggtgtccccaccatgtggaatgccatgctgcacgccgcc
gccgatgtggacagctccgacttcgaacaactcaggatcgcaatctccggtggcgcatca
cttcccggtgaagtcgctcgcgccttcgaagcacggttcaactgcacgatcctcgagggt
tacggcctcaccgagacgagcgcgttcgggactttcaacagcatcgaccgcgtcgcaaag
atcggatacaccggccgcgccgtaccgcgcaccgaggtcgaggtgcgtgatcacgacgga
aatgtctgcgaggcaggcacagtgggcgaggtgttcatcaaaggaccgacggtcatgaag
ggttactggaagcgccctgaagacaccgccgccgttctttccaacgacggatggttccgc
accggagacctcggtgagaccgatcccgacggggaccttcgcatcgtcgaccgagtgaag
gacctcatcatccgtggtggatacaacgtctatccgggcgaggtcgaagaggtgctctac
cagcaccccgacatcatcgaagccgcagtgatcggcatacccgacgactactacggggag
gaagttgccgcagtggtggccgtgcgtccaggctccgacctcgaagcagacgccgtcact
tcgtgggctcgggaacgtctctccgcctacaagattccccgagtcgtccagttcatcgac
gcactcccgaagggttcgacgggaaagatcctcaagcgatcgatcgaccgaaccgaactc
ctcgcccagaagcagaactga
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