Rhizobium etli CFN 42: RHE_CH00605
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Entry
RHE_CH00605 CDS
T00317
Symbol
appD
Name
(GenBank) oligopeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH00605 (appD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH00605 (appD)
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHE_CH00605 (appD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_16
AAA_22
Capsid_VP7
AAA_25
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABC89421
RhizoBase:
RHE_CH00605
UniProt:
Q2KCL5
LinkDB
All DBs
Position
complement(621891..622919)
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AA seq
342 aa
AA seq
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MDAIPHTADTILDIKGLRTVFRIRSGEVTAVNGIDLSVAAGETLALVGESGSGKSVTSLS
VMRLLTRNIGAIAAGSIHLKRKNGAVSDLVSIAEPEMRAIRGNDIGMVFQEPMSSLNPVY
TIGDQISEPIRIHRGADRKTAMDAAVALLDSVGIPDARRRAGQYPHELSGGMRQRATIAM
ALACDPTLLIADEPTTALDVTIQAQILALLQRLQRERGMAMLFVTHNLGVVAEIAHRVAV
MYAGRIVETGPVAEVFRNPRHPYTIGLLASMPKLGDASRMKQAGERLAAIPGVVPSLMNM
PAGCAFQPRCKFAIDDCRVAVPPLADVNPRHQSRCIRWQEIR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatgccataccacataccgccgacaccattctcgacatcaaggggctgcggaccgtc
ttccgcatccgctcgggcgaggtgacggcggtcaacggcatcgatctgagcgtggccgcc
ggcgagacgcttgcgctcgtcggcgagtccggttcgggcaaatcggtaaccagcctttcg
gtcatgcggctcctgacccgcaatatcggtgcaatcgccgccggtagcatccacctgaag
cgcaagaatggtgcggtcagcgaccttgtctcgatcgccgaacctgagatgcgcgccatt
cgcggcaatgatatcggcatggtctttcaggagccgatgtcgagcctcaatcccgtctat
acgatcggcgaccagatctcggagccgatccgcatccatcgcggagcggaccggaagacc
gccatggatgcggccgtcgcgcttctcgacagtgtgggcattcccgatgccaggcgccgt
gccggtcaatatccgcacgaattatccggcggcatgcgccagcgcgccacaattgccatg
gcccttgcctgcgacccgacgctgctgatagccgacgagccgacgacggcgctcgacgtc
actatccaggcgcagatcctcgccctcctgcagaggctgcagcgcgagcgcggcatggcc
atgctcttcgtcacccataatctcggcgtcgtcgccgaaatcgcgcatcgggtggcggtg
atgtatgccgggcggatcgtcgagaccgggccagtggccgaggttttccgcaatccaagg
catccctacacgatcggccttctggcctcgatgcccaaacttggggatgcaagccggatg
aagcaggccggtgaaaggctggcggccattccaggcgtcgtaccgagcctgatgaatatg
cccgccggttgcgctttccagccccgctgcaaattcgcaattgacgactgccgtgtggct
gtgccgccgctagccgacgtcaatccgcgccaccagagccgctgcattcgctggcaggag
atccgatga
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