Rhodococcus fascians D188: A3L23_02926
Help
Entry
A3L23_02926 CDS
T04328
Symbol
patA
Name
(GenBank) Putrescine aminotransferase
Organism
rfa
Rhodococcus fascians D188
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Beta_elim_lyase
THF_DHG_CYH_C
Shikimate_DH
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AMY54259
UniProt:
A0A165M4X0
LinkDB
All DBs
Position
2996340..2998910
Genome browser
AA seq
856 aa
AA seq
DB search
MTDTTIDVSVVPERSGRSGFAGSVNPELYRLLTALNLDREYVRGDGTVLFDSAGRRYLDF
AGAYGALPFGHGPTPIWQAINDVRCSGEPIFVQPSVLTAAGELADRLGRIAPEGLTRTTF
VNSGTEATEVALKIARAHTGRLGVLTTGNSFHGKTLGALSATGNIKYQSGFGAPVSGFDH
IAFGDAEALEAALAAAPDHYAVFLVEPIQGEGGVVCPPDGYLRQVQEICNRHGVLLALDE
VQTGLGRTGRMFAAEHEGVVPDILTLAKALGGGIVPVGAVLCRPELVGESFAIRHTSTFA
GNALATRVGLAVLEELTRDDCAVVTGAAALGRQLKNDLAGLAEKYPSVVTEVRGRGLLLG
IELTADVNFVGRQSLLGSIADQHNLSAVICSYLLNVEGIRVAPTLFGNRVIRIEPPLTVS
SSACSRLVAALDRALGYAAEGDMDGLFGHLLGRPTVATPAALTALRPGRTPDIAVRPGDR
RFAFIAHPLDLGFFAAFDPALEVFGNAERQDLLERFAASTSELDPASFVIGSGRVSGFGD
ATAHGDLIGLPYTSQQLLQLPTERALAVVGGAVELAISRGATVVGLGGYSSVITGNGLGL
GATSRPITTGNTFTAAASLRAVRRVCQERGIDVARARVTILGAGGAIGRTIGKQLAGEVG
SIALVGRRGENSVIAPKLWAAAQEMVASAGGGSGDLAVAAAEVDGDLDDLIRSRHIEFFT
DPVAAVRDSLIVIAATSAPQSLIDPTDLMQGAIVCDVAQPPNIGRDVRGERPDVTVFDGG
IVRVPSGSDFGLTYGLAPGLTYACMAETMLIALSGEFALRSIGTTLDGENVERLGALADV
HGFTLAEATRWRQDAH
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacgacaatcgatgtatctgtagtacccgagcggtcgggtcgctcgggattt
gcgggcagcgtcaatcccgagttgtaccgactgctgactgcgctgaatctcgatcgcgag
tacgtccgcggcgacggcaccgtgctgttcgattctgcgggccgtcggtatctggacttc
gcgggtgcctacggggcgctgccgttcgggcacgggccgacgcccatctggcaggcgata
aacgatgttcggtgcagcggcgagcccatcttcgtgcagccctcggtgctcacggccgca
ggtgaactggcggatcgtctggggagaatcgcacccgagggattgacgcgtacgacgttc
gtcaacagtggcaccgaagcgacggaggtggcgctgaagatcgcgcgggcccataccggc
cgcctcggggtgttgacgaccgggaacagttttcacggcaagacgttgggggcgctgtcg
gcgacgggaaatatcaagtaccagagtggattcggggccccggtatcgggattcgaccac
atcgctttcggcgatgcagaggcactcgaggcggctctggcggctgcgccggatcactat
gcggtgttcctcgtcgagccgattcagggtgagggcggcgtggtgtgcccgcccgacggt
tacttgcggcaggtccaggagatctgcaaccgccacggtgtgttgctcgcgctcgacgag
gtgcagacgggactcggccggaccggccggatgttcgcagccgagcacgagggcgtggtt
cccgacattctgactctcgcaaaggcgctcggcggcgggatcgtgccggtgggcgcggtg
ctgtgccgcccggagctggtgggggagagtttcgcgattcgccacacgtcgacgttcgcg
ggcaatgccttggccacacgggtcggcctggccgtcctcgaggagttgacccgagacgac
tgcgcggtggtcaccggagctgccgcgctcggacgacagttgaagaacgatctggccggc
ctggccgagaagtatccctcggtggtcaccgaggtacgtggtcgcggattactgctggga
atcgaactcaccgcggatgtgaacttcgtcggacggcagtctctgctcggttcgatcgcg
gatcagcacaacctgtccgcggtgatctgctcgtatctgctcaacgtcgagggtattcgc
gtggcaccgactctgttcggcaacagggtgattcgtatcgagccaccgttgacggtctcg
tcgtcggcatgctcgcgtctggtcgctgccctcgatcgcgcgctcggctacgcggccgaa
ggggacatggacggattgttcggacatctgctcgggcgtccgactgtcgccactcccgcg
gcgctcaccgcattgcgtccgggccgtactcccgacatcgcggtacggccgggcgatcga
cgcttcgccttcatcgcccatcctctcgatctcggcttcttcgctgcgttcgatcctgcg
ctcgaggtgttcggcaatgccgagagacaggacttgctggagcgattcgccgcgtcgacg
tccgagctcgatccggcctcgttcgtcatcggcagcgggcgggtgtccggattcggagac
gcaactgcgcacggcgacctgatcgggctgccgtacacctcccagcagttgctgcagctg
ccgaccgagcgtgcgctggcagtggtgggcggagccgtcgaactcgcgatctcgcgcggg
gcaaccgtggtcggactcggcgggtactcgtcggtgatcaccggaaacgggctgggtctc
ggtgcgacatctcggccgatcacgacgggcaacaccttcaccgcggccgcgagtctgcgg
gccgtccgacgtgtgtgccaggaacggggtatcgatgtcgctcgcgctcgggtgacgatt
ctcggtgcgggtggggcgatcggacggaccatcggtaagcaattggccggtgaggtcggc
agtatcgcgttggtgggcaggcgcggcgagaactcggtgatcgcgccgaagttgtgggct
gcggcgcaggagatggtggcgagtgccggtgggggttcgggtgacctggcggtggctgcc
gccgaggtcgacggcgacctcgacgatctgatccgttcgcggcacatcgaattcttcacc
gatcctgttgctgctgtgcgtgattcgctgatcgtcatcgcggcgacgtcggctccgcag
tcgttgatcgatccgacggacctgatgcagggtgccatcgtctgcgacgtggcgcagcca
ccgaacatcggccgggacgtccgcggtgaacggccggacgtgacggtgttcgacggcgga
atcgtgcgggtgccgtcgggctcggatttcggtttgacgtacgggttggctccggggttg
acgtacgcgtgcatggccgagacgatgctcatcgcgttgtcgggcgaattcgcgctgcgc
agcatcgggaccactctggacggtgagaatgtcgaacggttgggtgcgctggccgacgtt
cacggcttcactctcgccgaggccacccggtggcgtcaggacgctcactag
DBGET
integrated database retrieval system
