Rickettsia felis: RF_1035
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Entry
RF_1035 CDS
T00252
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rfe
Rickettsia felis
Pathway
rfe00470
D-Amino acid metabolism
rfe00550
Peptidoglycan biosynthesis
rfe01100
Metabolic pathways
rfe01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rfe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RF_1035 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RF_1035 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RF_1035 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfe01011
]
RF_1035 (ddlB)
Enzymes [BR:
rfe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RF_1035 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rfe01011
]
Precursor biosynthesis
Amino acid ligase
RF_1035 (ddlB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AAY61886
UniProt:
Q4UKP1
LinkDB
All DBs
Position
complement(1097605..1098570)
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AA seq
321 aa
AA seq
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MNKYQTHWVEHSEVKILSTTGKKHIALVAGGMSAEREVSLVSSEGVSKALIELGYKVTFI
DMGADIAVKLQEIKPDIVFNCLHGTYGEDGCLPGLLNIMRIPYTHSGVLSSALAFDKIHS
RSWFLTNNINMAESIIVNKSDNIKSDPVKRPYVIKPLTQGSSIGVEVIFEEDDFNFADYN
FPYGYQVIIEQYIKGRELQVAVLNGKALGALEIKLLKNRFYDYETKYTEGFAEHLCPAPL
PTNLYEKLLVESEKIYKTMNCKGPARAEFILEEQTNKLYALEINTHPGMTPLSIVPEIAA
YAGINFTNLIEEIIKTASFES
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatatcaaacacattgggtggaacattctgaagtcaaaatattaagtactacc
ggtaaaaaacatatagcgttagtagcgggcggtatgtctgctgagcgtgaagtatcctta
gtatcaagcgaaggagttagtaaagccttaattgaattaggatataaagttacctttatt
gatatgggagcggatattgcggttaaattacaggaaataaaacctgatattgtttttaac
tgcctacacggtacgtatggtgaagacggttgcttgcctggattacttaatataatgcgg
attccttatactcatagcggcgtgttatcttcagctttagcattcgataaaatacattct
aggagctggtttttaacgaataatattaatatggctgaaagtattatcgtaaacaaaagc
gataatataaaaagcgatcctgtgaagcgaccatatgtaattaagcctcttacgcaaggt
tcaagtatcggtgttgaggtgatatttgaggaagatgattttaactttgccgattataat
ttcccttacggttatcaggtgataatagagcaatatataaaaggacgagagttgcaagta
gcggtattaaacggcaaagctcttggggctttagaaattaaattactaaagaatcgtttc
tatgattatgaaactaaatataccgaaggatttgctgagcatctttgtcctgctccgcta
cctactaatttatatgaaaaattacttgtagaatcagaaaaaatttataaaacaatgaat
tgtaaaggtcctgctagagcagaatttattttagaagagcagacaaacaaattatatgct
ttggagataaatactcacccaggtatgacgcctttatcaatagtgccagaaattgcagct
tatgcagggataaattttactaacttaattgaagaaattataaagacggcaagctttgaa
tcatga
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