Rhinolophus ferrumequinum (greater horseshoe bat): 117025755
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Entry
117025755 CDS
T07722
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rfq01002
]
117025755 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfq04121
]
117025755 (USP40)
Enzymes [BR:
rfq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117025755 (USP40)
Peptidases and inhibitors [BR:
rfq01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117025755 (USP40)
Ubiquitin system [BR:
rfq04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117025755 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Cytochrome_cB
Motif
Other DBs
NCBI-GeneID:
117025755
NCBI-ProteinID:
XP_032967795
Ensembl:
ENSRFEG00010004446
LinkDB
All DBs
Position
8:5459520..5530680
Genome browser
AA seq
1235 aa
AA seq
DB search
MFGDLFEEDYSSVSYNQYGKGKKLKTKALEPPAPREFTNLSGIRNQGGTCYLNSLLQTLH
FTPEFREALFSLGPEELGSLEEKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDS
FGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTIVNQIVCKECKNVSE
KQEDFLDLTVAVKNVSGLEEALWNMYVEEEVFDSDNLYHCGTCDRLVKAAKSAKLRKLPP
FLTVSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDELEYMYDLFSVIIHKGG
CYGGHYHVYIKDVDCLGNWQFQEEKSKPDVNLKDLQNEGEIDDPLMILKAILLQEENNLI
PVDQLGQKLLKKIGISWNKKYRKQHGPLRKFLQLHSQLFLLSSDESTVSLLKNCSLQAEF
SVQRNDPEVFKTLTSESPGLNDRTSCPHWFDINDSKVQPIKEKDIEQQFQGKESAYMLFY
RKSQLQRPPEARANPRYRVPCHLLNEMDAANIELQRKRAEYDSTNNDFELHLHVGPHYHF
FNGALHPVSQTESVWDLTFDKRKTLGDLRQSVFQLLDFWEGDMVLSIAKCLPAGLHVYQT
LDGDDLTLCEMEITDEEDIFVWNGVEVGGIQIPTGSDCEPLLLNVLHLATSGEGEKCQQL
TESPQVFPSNAEVGSVFTALAIPVGAIFLSSTECTDEGWTAIPQEGWRKTFREQGLTNGS
SVLIQDSSNNNNSLLTKQGEWITTVNETDWIQVKNLCQSESEEELVQIPATANTVVFDVR
IKAIKELKLMKELAENSCLRPIDRDGKLLCPVPDNYTLKEAELSTGSSLGLCPGKAPTSS
QLFLFFAVGSDIQPGTEMEIIVEETITVRDCLKIMLENSGLPGDTWHLRKMDWCYEAGEP
LREEDATLKELMICSGDTLLLIEGKLPPPGFLKVPIWWYQPRGCAGPWRSHQDQTNGPPP
QGGVWGATATQGAPGDTYAEASLCYLGDIEISEDATLAELKSQAMTLPSFSEFFIPSPAF
LRAWTVESKRPSRLLRINQQQLREYKLGRRTEICLEPLQKEENLGPQDVLLRTQRRLPGE
RAYGPPVDLVWDTARGWTTDALRRRVADCCSLPVEKIGIAKYFPEKFEWLPVSSWSQQTT
KRKKKKKQENLQGAPYYLKDGDTIGIKNLLVEDDGDFSTVRDDAGKEKQKQLALGRKKSQ
EALRGQSSSVVSGAESPGRPHRPEASLSIHVGSFR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggacctatttgaagaggattattccagtgtgtcatataatcagtatggaaaa
gggaagaaattaaagaccaaagctttggaaccacctgctcctagagaattcaccaattta
agcggaatcagaaatcagggtggaacctgttaccttaattcccttcttcagactcttcat
ttcacacctgaattcagagaagctttattttctcttggcccggaagagcttggttcttta
gaggaaaaggataaacctgatgcaaaggttcgaatcatacctttacagttacagcggttg
tttgctcagcttctgctcttagaccaggaagctgcctccacagcggacctcactgacagc
tttgggtggaccagcaatgaggaaatgaggcaacatgatgtgcaggaactgaatcgaatt
ctctttagtgctttggaaacttcattagttgggacctccggccacgacctcatcaatcgt
ctctatcacggaaccattgttaaccagattgtttgtaaagaatgtaagaatgtcagtgaa
aagcaggaagatttcttagatctaaccgtagcggtcaaaaacgtatcaggtttggaagag
gcactctggaacatgtatgtagaagaggaagtttttgactctgacaatttgtaccactgt
gggacttgtgacaggctggtgaaagccgcaaagtcggccaaattacgtaagctgcctccc
tttcttactgtttcattgttaagatttaattttgattttgtgaagtgtgaacgatacaag
gaaactagctgttacacattccctctccggatcaatctcaagcctttttgtgaacagagt
gaactggatgagttggaatacatgtacgacctcttctcggttatcatacacaaagggggt
tgctacggaggccattatcatgtgtacattaaagacgtcgactgtttgggaaactggcag
tttcaagaggaaaaaagtaaaccagatgtgaatttgaaagatcttcagaatgaaggagag
attgatgatccactgatgattctaaaagcaattttattacaggaggagaataatctaatt
cctgtcgatcagctcggccagaaactcttgaaaaagatagggatatcttggaacaagaag
tatagaaaacagcatggaccactgcgaaagttcttacagcttcattctcagctatttctg
ctcagttcagatgaaagtacagttagtctattgaagaactgttctctgcaggctgagttc
agtgtccaaaggaatgatccggaagttttcaagacacttacttcagaatccccaggatta
aatgataggacctcctgtcctcactggtttgatataaatgattccaaagtccaacccatc
aaggaaaaggatattgaacagcaatttcagggcaaagaaagtgcctacatgttgttttac
cggaaatcccagttgcagagaccccctgaagctcgagctaatccaagatacagggttcca
tgtcatttgctaaatgaaatggatgcagccaacattgaactgcaaagaaaaagggcagaa
tatgattctacaaacaatgattttgaattgcatctccacgtgggccctcattatcatttc
ttcaatggggctttgcacccagtctctcaaacagaaagtgtgtgggatttaacctttgat
aaaagaaaaacattaggagatcttcgacaatcagtatttcagctgttagacttttgggaa
ggagacatggttcttagtattgcaaagtgtttaccagcaggacttcacgtctaccagaca
cttgatggagatgacctgacactgtgtgaaatggaaattactgatgaggaagacatcttt
gtatggaatggagtggaggttggtggaatccagattccaactggtagtgactgtgaacct
ctgcttttaaatgttcttcatctagcaacaagcggtgaaggagaaaagtgtcagcagctg
acagaatctccacaggtctttccatctaatgcagaagtaggctctgtcttcacagcctta
gcaatcccagtaggtgccatctttctcagcagcactgaatgcacagatgagggctggact
gccattccccaggaaggctggaggaagacattcagagagcaaggcctcacgaacggaagc
tcggttctgatccaagattccagtaacaataataacagtttgttgaccaaacaaggtgaa
tggatcacaactgtgaatgagaccgactggatccaagttaaaaatttatgccaatcagaa
tctgaagaggagctcgttcaaataccagcaactgctaacacagtggtgtttgatgttcga
attaaagccataaaggaattaaaattaatgaaggaactagctgagaacagttgtttgagg
cctattgatagagacgggaagcttctttgtccagtgccagacaattatactttgaaagaa
gcagaattgagcacggggagttcattgggactgtgtcctggaaaagccccgacttcctct
cagctgttcctgtttttcgctgtggggagtgacattcagcctgggacagagatggagatt
atagtagaagaaacgataactgttagagattgtttaaagataatgctggagaactctggc
cttcctggagacacgtggcatttacgaaaaatggattggtgctatgaagctggggagcct
ttacgtgaagaagatgcaactctgaaagagcttatgatatgttctggagatactttgctt
ttaattgaaggaaaacttcctcctccgggtttcctgaaggtgcccatctggtggtaccag
cctcgcggctgcgcaggcccatggaggagtcaccaggaccagacgaacggtccccctccc
caaggcggggtctggggagccactgccacccaaggagctcctggcgacacatatgcagaa
gcttccctctgctacttgggagacattgaaatctcagaagacgccacgttggccgagctg
aagtctcaggccatgaccttgccgtccttctcagaatttttcatcccatccccagccttc
ctcagagcctggacagtggaaagcaagcgccccagcaggcttttacgaatcaaccagcag
cagctcagggaatataaactgggaaggagaactgagatctgcttagagccccttcagaaa
gaagaaaacttaggcccccaggacgtgctgctgaggacacagaggcgtctccccggagag
agggcgtacgggccacctgtggacttggtgtgggacacggcccgaggctggaccacggac
gccctgcggcggcgggtggctgactgctgttcccttccggtggaaaagatcggaatcgcc
aaatactttcctgagaagtttgagtggcttccagtatctagctggagccagcaaactacc
aagaggaaaaagaagaaaaagcaagagaatttgcaaggggcgccttattacttgaaagat
ggagacactattggcattaagaatctgctggttgaagatgacggtgatttcagtacagtc
agagatgacgctggaaaagagaaacagaaacaactggccctgggaagaaagaaaagccag
gaagctcttcgtgggcagagcagcagcgttgtctccggtgcagagtcgcctggccggccc
cacagaccagaagcttctctctccatccacgttgggagtttcaggtag
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