Rhodoferax ferrireducens: Rfer_0931
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Entry
Rfer_0931 CDS
T00334
Name
(GenBank) Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rfer_0931
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfr02000
]
Rfer_0931
Transporters [BR:
rfr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Rfer_0931
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_25
AAA_29
CbiA
AAA_16
TniB
NACHT
Motif
Other DBs
NCBI-ProteinID:
ABD68678
UniProt:
Q21ZX5
LinkDB
All DBs
Position
complement(980404..981468)
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AA seq
354 aa
AA seq
DB search
MKPPLTSPDPLRLDVRNLSTFFDTDEGLIRSVADVSFSIHPGKTTALVGESGSGKSVTSL
SLMRLLSRTDSTQVSGQALFTNRAGETLDLLALPEPAMRRIRGNEIAMIFQEPMTSLNPV
FTVGEQIAESVRLHMGLDRAAALAHALRMLELVEIPAATRRLHEYPHQLSGGMRQRVMIA
LAMACNPTLLIADEPTTALDVTIQAQILELMRRLQRETGMSILFITHNLGVVAHHADDVA
VMYAGRIVEAAPVRALFTSPQHPYTQGLLACLPAQQRKRELANGETRVKRRLYAIRGQVS
SPLSPPPGCAFEPRCDRALAACKEAMPELESAGPQRAARCILVSEAALVLTETA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcccctgacatcccctgatcccttgcggctcgacgtccgcaacctgagcact
ttttttgacaccgatgagggactgatccgctcggtggccgatgtcagcttcagcatccat
cccggcaaaaccaccgcgctggtgggcgagtccggctcaggcaaatcggtgaccagcctg
agcctgatgcggctgctgtcccgcaccgattccacccaggtcagcggccaggccctgttt
accaaccgcgccggtgaaacgctggacttgctggcgctgcccgagcccgccatgcgccgc
atacggggcaatgaaatcgcgatgatttttcaggaacccatgaccagcctgaatcccgtc
ttcacggtgggtgaacagattgcggagtcggtgcgcctgcatatgggactggaccgcgca
gcggccctcgcacacgccctgcgcatgcttgaactggtggaaataccggctgccacgcga
cgcctgcatgaatacccgcaccagctgtctggcggcatgcgccagcgcgtgatgattgcg
ctggccatggcctgcaacccgaccttgttgattgccgacgaacccaccaccgcgctggat
gtcaccatccaggcgcagattttggagctgatgcgccgcttgcagcgagagaccggcatg
agcatccttttcatcacgcacaaccttggggtggtggcccaccacgccgatgatgtggcg
gtgatgtatgcgggccgcattgtcgaggcggcccctgtgagagcgctgtttacctcgccg
cagcacccctacacgcagggcctgctggcctgtctgccggcacagcagcgcaaacgcgag
ctggccaacggagaaacgcgcgtcaagcgccgcctgtatgccattcgcggccaggtctcc
agcccgctgtcgcccccgccgggctgtgcgtttgaaccgcgctgcgaccgtgctctggcg
gcatgcaaggaagccatgcccgaattggaaagtgccggaccgcaacgtgccgcgcgctgc
attctggtgtctgaagctgctcttgttttgacggagaccgcatga
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