Rhodoferax ferrireducens: Rfer_3240
Help
Entry
Rfer_3240 CDS
T00334
Name
(GenBank) tryptophanyl-tRNA synthetase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rfer_3240
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfr01007
]
Rfer_3240
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfr03016
]
Rfer_3240
Enzymes [BR:
rfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
Rfer_3240
Amino acid related enzymes [BR:
rfr01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Rfer_3240
Transfer RNA biogenesis [BR:
rfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rfer_3240
Prokaryotic type
Rfer_3240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF1508
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ABD70949
UniProt:
Q21TF4
LinkDB
All DBs
Position
3590119..3591417
Genome browser
AA seq
432 aa
AA seq
DB search
MSSTRFLTGITTSGTPHLGNYVGSIRPSVRASLRADVESFYFLADYHALIKIDEPARIQR
STLEIAASWLAAGLDPERVVFYRQSDVPEIPELTWLLTCVIGKGVLNRAHAYKAAVDKNT
AAGIDPESDVSAGLFMYPVLMGADILMFNAHKVPVGRDQVQHIEMARDMAHSFNHRYGDH
FVPPEAEIEDNVATLPGLDGRKMSKSYDNTIPLFAPRAQLKKLIASIVTDSRAPGEPKDT
EGSALFQIYQAFATPEESSTLRQAYADGIAWSDAKQIVFERIDDEIAPLREVYQALLDDP
ARIESILRAGAAKARHIATPFMGRLRQAVGLRDLRTQSSKAAKSVKSALPVFKQYRENDG
QFYFKLLDTDGRLLLQSTGFASPKVAGQTIATLQTQGASALNELKDQLQWGLDVQTQDID
TALQALLDAKTK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagttccacgcgttttctgaccggtatcaccacctctggcaccccccacctcggcaac
tatgtcggctccatccggccttcggtgcgggccagcctgagggccgatgtcgagagtttt
tattttctggccgactaccacgccctgatcaagattgatgaaccggcacgcatccagcgt
tccacgctggaaatagccgccagttggctcgccgccgggctggaccccgagcgcgtcgtc
ttctatcgccagtccgatgtcccggaaattccggaactcacctggctgctgacctgtgtc
attggcaagggcgtgctgaaccgggcgcacgcctacaaggcggcggtcgacaaaaatacc
gccgcaggtattgaccccgagtccgatgtcagcgccgggctgttcatgtacccggtgctg
atgggtgccgacattctgatgttcaacgcacacaaggtgccggtcgggcgcgaccaggtg
cagcacatcgagatggcgcgcgacatggcgcacagcttcaaccaccgctatggcgatcac
tttgtgccgcccgaggccgaaattgaagacaacgtcgccaccctgcccggtctggacggg
cgcaagatgagcaagagctacgacaacaccatccccctgtttgcgccgcgcgcacaactc
aaaaagctcattgcgagcatcgtcaccgattcgcgcgcaccaggtgagcccaaagacact
gaaggctctgccctgttccagatttaccaggcctttgccacgccagaggaaagcagcacg
ctgcgccaggcttatgccgatggcatcgcgtggagcgacgccaaacaaattgtttttgag
cgcatcgacgacgaaattgcaccgctgcgcgaggtctatcaggcgctgttggacgacccg
gctcgaatcgagtccatcctgcgcgcgggcgcagccaaggcccgtcatattgccaccccc
ttcatgggtcgtttgcgtcaggccgtgggcttgcgtgacctgcgcacgcaaagcagcaaa
gccgccaagtccgtcaaatccgccttgccggtcttcaaacaataccgcgaaaacgacggt
cagttttacttcaaactgttggatacggacggccgtttgctgctgcaaagtacgggcttt
gcttcacccaaagtagcaggccaaaccattgccacgctgcagacccaaggtgcgagcgcc
ctgaatgaactgaaagaccagttgcaatggggcctggacgtgcaaacccaggacattgat
actgccctgcaagcgttgctggatgccaaaaccaagtga
DBGET
integrated database retrieval system
