Rhodoferax ferrireducens: Rfer_3365
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Entry
Rfer_3365 CDS
T00334
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfr03016
]
Rfer_3365
Enzymes [BR:
rfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Rfer_3365
Transfer RNA biogenesis [BR:
rfr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Rfer_3365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ABD71074
UniProt:
Q21T29
LinkDB
All DBs
Position
complement(3735773..3737131)
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AA seq
452 aa
AA seq
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MSKKVFIKTYGCQMNEYDSDKMSDVLGAAQGYEPTDNVEEADLILFNTCSVREKAQEKVF
SDLGRVKHLKKKGALIGVGGCVASQEGAAIIERAPYVDVVFGPQTLHRLPQLLAERERLN
RSQVDISFPEIEKFDHLPPARVEGASAFVSIMEGCSKYCSYCVVPYTRGEEVSRPFEDVL
VEVAGLADQGVKEITLLGQNVNAWRSRMIGAASALSSEMADFATLLEYVSDIPGIERIRY
VTSHPNEFTPSLIAAYDKLPKLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTVRKLRAI
RPDMALSSDFIVGFPGETEDDFSKMMKLIDDVGFDNSFSFIFSPRPGTPAANLHDDTPHE
VKLRRLQHLQTVINDSIKRISESRLGTVQRILVEGASKRDSTELMGRTECNRVVNFCGQP
RLIGQMVDVAITETRSFTLRGEVVTQNEVLTG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaagtcttcatcaaaacctacggctgccagatgaacgagtacgactcggac
aagatgagcgatgtgctgggcgctgcgcagggctacgagcccactgacaacgtggaagaa
gccgacctgatcttgttcaacacctgctcggtgcgtgaaaaggcgcaggagaaagtgttc
tccgacctggggcgtgtcaaacacctgaagaaaaaaggcgcgctgattggcgtcggtggc
tgtgttgccagccaggaaggtgccgccatcatcgagcgcgcgccttatgtcgatgtggtg
tttgggccgcaaaccctgcaccgcctgccgcaactgctggccgagcgcgagcggctcaac
cgctcgcaggtggacatcagctttcccgagatcgagaagtttgaccacctgccgcccgcc
cgggtcgaaggcgccagcgcgttcgtgagcatcatggaaggctgctccaaatactgcagc
tactgcgtggtgccctacacccgcggcgaagaagtgagccgcccgtttgaagatgtgctg
gtcgaggtcgccggcctggcggatcagggtgtgaaagaaatcacgctgctggggcaaaac
gtcaacgcctggcggtcccggatgattggcgctgccagcgcgctctcaagcgagatggcc
gacttcgccaccctgctggaatacgtgtcggacattcccggcattgagcgcatccgctac
gtgaccagccaccccaacgagttcacgccttcactgattgcggcctacgacaagttgccc
aagctggtcagccatttgcacctgccggtgcagcacggctcggaccgcatcctgatggcc
atgaagcgcggctacaccgccatggaatacaaaagcacggtgcgcaagctgcgcgccatc
cggcctgatatggcgctgagcagcgacttcatcgtcggcttccccggtgaaaccgaagac
gacttcagcaagatgatgaaactcatcgacgatgtgggctttgacaacagtttcagcttc
atcttcagcccgcgccccggcaccccggcggccaatctgcatgacgacaccccgcatgag
gtgaagctgcgccggctgcagcatttgcagacggtcatcaacgacagcatcaagcgcatc
tcggagagccgcctggggacggtgcagcgcattctggtggagggtgcctccaagcgcgac
agcaccgaactgatgggccgcaccgagtgcaaccgggtcgtcaacttctgtggccagccg
cgcctgatcgggcagatggtggatgtggccatcacggagacgcgcagcttcacgctgcgc
ggtgaggtggtgacgcaaaacgaggtgctgaccgggtag
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