Rhodoferax ferrireducens: Rfer_3606
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Entry
Rfer_3606 CDS
T00334
Name
(GenBank) diguanylate cyclase with PAS/PAC sensor
Organism
rfr
Rhodoferax ferrireducens
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_3
PAS_9
dCache_1
PAS
PAS_4
PAS_8
PAS_11
Motif
Other DBs
NCBI-ProteinID:
ABD71309
UniProt:
Q21SE4
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Position
complement(4016045..4018318)
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AA seq
757 aa
AA seq
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MKRFLRHARHWLLLVVCLGALGAYLAYNLHGEHERVEATERERLATQSKVIEDNLSRQLV
AINLALESIMVELPDWAGRPDGRELVSRRLKSMEVSMPSVRTFAVLDEKGTVTASNREEL
LGRNFHDRDYFQTALRAPSTKTLYVSAPFKTVLDTFVISVARVITGPQGQFAGLVSASVD
PVDMQILLNSVRYADDMRSMLVHGDGTIFVSQPALVDVVGKNLSVAGSFFRQHLESKRPV
SYFEGKAITTGDKRLPVLRTIQPADLTMDKPLVVSVSRGWDAMFAPWQRDVRSQLLVYAL
FGLLCMAGLIIYQRQRVQQRMINQRLKLATEATGVGIWEFDLKTRRYHWDLAMFGLFGLN
PQTVNALNNDWQQLLLPGELLRMKDATRVTIKQGQAFDLTFQIRRQDGQVRFMRNRAVLY
NDGSHAASRLIGTTEDVTERKLREADLRVAATAFECQESIMVTDANQLILRVNRAFTELF
GYTAQDVLGATPRVLQSGRHDPAFYAAMWDGITRGGAWQGEIWDRRKNGECFPVWLSITV
VCGDDGGVSHYVATHTDITLRKAAEDDIRQLAFYDPLTGLPNRRLLQDRLHQAMSQARRE
RGRLALLFLDLDKFKPVNDDFGHQAGDELLQAVAQRLQACVRESDTVARLGGDEFVLLLP
SIEAAQDAMAVAEKIHQAFGRPFTLSAGRNATMSFSTGIAVYPEHASDEKALMRHADEAM
YQAKAAGRDRFVLFAPASEPATLLTPADSGGTAPTIG
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgttttctgcgtcatgcgcgacattggctgctgctggttgtctgcctgggcgct
ctgggcgcgtacctcgcctacaaccttcatggtgagcatgagcgcgttgaggcgacggaa
cgcgagcgcctggcgacacagtcgaaggtgattgaagacaacctctcgcgtcagctggtc
gccatcaacctcgcgctcgaatcgatcatggtcgaattgcccgattgggcgggccggccc
gatggccgggaacttgtcagccgtcgcctcaagagcatggaagtatcaatgccttcggta
cgcaccttcgctgtgctggatgagaaaggaacggtcacggcgtcgaaccgtgaagaactg
ctggggcgcaattttcacgaccgggactattttcagacagcgctgcgggcgccgagtacc
aagaccctctacgtcagtgcgccgttcaaaacggtactggacacatttgtcatcagtgtt
gctcgcgtcattaccgggccgcaagggcagtttgctggtctggtgtcggcgtcagtggac
ccggttgacatgcagatattgctgaattcggtgcgctatgccgatgacatgcggtcgatg
ctggtgcacggtgacggaacgatatttgtcagccagcccgcgttggtcgatgtagtcggc
aaaaatttgtctgttgcgggctcctttttcagacagcatctggagagcaaacgcccggtc
agctatttcgagggcaaggccatcaccacgggagacaagcgactgcctgtgctgcgaacc
atccagccggccgacctgaccatggataaaccgctggtcgtgtcggtcagccggggctgg
gatgccatgtttgccccttggcagcgcgatgtcaggagccagcttctggtgtacgcactc
ttcgggttgctgtgcatggcgggcctcatcatttatcagcggcaacgggtacagcagcgc
atgatcaatcagcggctcaagctggcaacggaggccaccggtgtcggcatttgggagttc
gatctgaaaacacggcgctaccactgggacctggcgatgtttggtttgtttggcttgaac
ccccagacggtcaatgcactcaataacgactggcagcagctcctcttgccaggggaactg
ctgcgcatgaaggacgcaacccgtgtcacgatcaaacaaggccaggcgtttgacttgaca
ttccagattcggcgccaggatgggcaggtgcgctttatgcgcaatcgggcggtgctctat
aacgacggctctcacgcggccagtcgcctgatcggaacgactgaggatgtcaccgaacgc
aagctgcgggaagccgatctgcgcgttgccgccaccgcctttgaatgccaggaatccatc
atggtcaccgatgcgaaccagctgattctgcgcgtcaaccgcgcatttaccgagctgttt
ggctacacggcgcaagacgttcttggcgcgacaccgcgggttttgcaatcaggccggcat
gacccggcgttttacgccgccatgtgggatggcatcacacgcggcggtgcctggcaaggt
gaaatctgggaccggcgcaaaaacggggagtgcttcccggtttggctcagcatcacggtg
gtctgtggcgacgacggtggcgttagtcattacgtggccacccacaccgacatcacgctg
cgcaaggcggctgaagacgatatcaggcaactggccttttacgacccgctgaccggcctg
ccgaatcggcgcttgctgcaagaccggctgcatcaggcgatgagccaggccagacgcgag
cgcggccgcctggcgctgctgttccttgatctggacaagttcaagcccgtcaacgatgat
tttggccaccaggcgggtgacgaattgttgcaggccgtggcgcagcggctgcaggcctgc
gtgcgcgagtcagacaccgtggcacgcctgggcggcgatgaatttgtgctgctgctgccc
agcatcgaggccgcgcaggatgccatggcggtcgccgagaaaattcatcaggcgttcggc
aggccgttcaccctgtcagcagggcgcaacgccaccatgtcgttcagcaccggcattgcc
gtctacccggagcacgccagcgatgagaaggcgctgatgcgccatgccgatgaggccatg
taccaggccaaggcggccgggcgcgaccggttcgtcctgtttgcgccggcctctgaaccg
gcaactttgctgacccccgccgacagtggcggtacggcccctaccattggataa
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