Pseudorhizobium flavum: RFYW14_00323
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Entry
RFYW14_00323 CDS
T07144
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv00300
Lysine biosynthesis
rfv01100
Metabolic pathways
rfv01120
Microbial metabolism in diverse environments
rfv01230
Biosynthesis of amino acids
Module
rfv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RFYW14_00323
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rfv01002
]
RFYW14_00323
Enzymes [BR:
rfv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RFYW14_00323
Peptidases and inhibitors [BR:
rfv01002
]
Metallo peptidases
Family M20
RFYW14_00323
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CAD6596533
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Position
1:complement(323649..324845)
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AA seq
398 aa
AA seq
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MSATNPVDNLQALIRCPSVTPAEGGALSALEGMLAPLGFKVERVVARAEGTPDVENLYAR
VGSGGPHLMFAGHTDVVPPGNEADWSHPPFAAEISDGMLFGRGAVDMKGGIACFVAAVAR
HIEKYGAPEGSISFLITGDEEGPAINGTDKLLQWAVDKGEKWDACLVGEPTNPDVLGDMI
KIGRRGSLSGRITVQGVQGHSAYPHLADNPIRGLLQLTHALMDEPFDHGTTDFPPSNLEV
TTIDTGNPAVNVIPAKATAAFNIRFNDTWTADSLQDEIIRRLETAATEGSLRPGRDPVRY
EIVWNERPSHVFLTRNDALIESLSLAVEKITGRRPALSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVSVEDLETLTNIYGSFIANWFTHARSA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccaatcccgtagacaatctccaggcgctcattcgctgcccttcggtcact
ccggcggaaggcggtgcgctttcggccctcgaggggatgcttgcgcccctcggtttcaag
gtggaacgggtcgtggcgcgggcggaagggacgccggacgtcgagaacctgtatgcccgt
gtcggttccggcggaccgcacctcatgtttgctggtcacacggatgtggttccccccggc
aacgaggcagactggtcccatccgccgttcgcggcagagatctccgacggaatgctgttc
ggccgcggcgcggttgacatgaagggcgggatcgcctgcttcgtggcggcggtggcgcgt
cacatcgagaagtatggcgcaccggagggctccatctccttcctgatcaccggtgacgag
gaaggaccggcgatcaacggtaccgataagctcctgcaatgggcggtggacaagggcgag
aaatgggatgcctgcctcgtcggcgagccgaccaatcccgacgtgctgggggacatgatc
aagatcggccggcgagggtctctgtcgggtcgcatcacggtgcagggcgttcagggtcat
tccgcctatccgcatctcgcggacaatccgatccgcggtctgctgcaactcacgcacgcg
ctgatggacgagccgttcgaccacgggaccacggattttccgccgtccaatctcgaggtc
acgacgatcgacaccggcaacccggccgttaacgtcatcccggccaaggccacggctgcc
ttcaacatccgcttcaacgacacctggaccgcggacagccttcaggacgagatcatccgc
aggctggaaacggcggcaaccgaaggcagccttcggccggggcgtgacccggtgcgctac
gagatcgtatggaacgagcggccgagccatgtcttcctgacgcgaaacgacgccctgatc
gaatccctgtcgctggccgtggagaagatcaccggcaggcgtcctgccctctccaccacg
ggaggaacctccgacgcccgcttcatcaaggactattgcccagtcgtcgagttcggcctc
gtcgggcagacaatgcacatggtcgatgagcgcgtgtcggtcgaggacctcgagacgctc
acgaatatctacggcagtttcatcgccaactggtttacgcatgcccggagcgcttga
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