Pseudorhizobium flavum: RFYW14_00720
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Entry
RFYW14_00720 CDS
T07144
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfv03009
]
RFYW14_00720
Enzymes [BR:
rfv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RFYW14_00720
Ribosome biogenesis [BR:
rfv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RFYW14_00720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAD6599942
LinkDB
All DBs
Position
1:729580..731418
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AA seq
612 aa
AA seq
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MTPKDKPKRGGAKSFERATKPGSATKGKPTGKAAFSAKAGLKQRPVKEAGKSDKPVAKQP
AEAATAPVDAAGSKPERISKILARAGVASRRDVERMIMEGRVRLNGTVLETPVVNATLED
RIEVDGQPIRGIERTRLWLYHKPAGLVTTNSDPEGRPTVFEYLPEDLPRVMSIGRLDINT
EGLLLLTNDGGLSRVLELPTTGWLRRYRVRAHGEVDQAALDKLKEGIAVDGVLYGAIDAT
LDRQQGHNVWITVGLREGKNREVKNVLGALGLEVNRLIRISYGPFQLGDLPEGQVVEVRG
RMLRDQLGPRLIEEAKANFDAPIYSDLGGSEEPEPVTTRAASRDDRERTGGWSQDRSSKR
QDSRRDDRRGKPVSRGDKRDDGDFGEKPKKRPPMGTSRTANVWMAPGARPTTDAKGKRTS
ARAEAEKLFDKPKLPSDRRVLVNRAEEDSDWIRAESPARESRDGDFPRKRPAGDRPDRGE
RSPRTERPFADRLRGEGSFREKPRGDRKPREEGERPRGRGYSDDARSERPRGDRPFGDRP
RGPRTEQDRSRGDRPRGSKPGGDRPFGGKPGGGKSFGGKPSGGKPGGGRGKPGGGGGRPG
GRPAGGKPRTRG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacacccaaagacaagccaaagcgcggcggagcaaagtccttcgaacgcgccacgaaa
cccggatcagcgacgaaaggcaagcccaccggcaaggctgccttctccgccaaggcggga
ctgaagcagcggcccgtgaaggaagccggcaagagcgacaagcctgtggcgaagcagccg
gcagaagctgcgacagcccctgtcgatgccgctggatcgaagccggagcgaatttccaag
atccttgcccgtgccggtgtggcctcccgccgtgacgtcgagcgcatgatcatggaaggc
cgggtgcggttgaacggcactgttctcgaaacaccggtagttaacgctaccctcgaggat
cgcatcgaggttgatggtcagccgatccgcggcatcgaacgcacccggctgtggctctac
cacaagcccgccggacttgtgacgaccaactccgacccggaaggacgcccgacggtcttc
gagtacctgcctgaggacctgccgcgggtcatgtcgatcgggcgccttgatatcaatacc
gagggactgctgctgctgaccaatgatggtggcctctcgcgtgtgctggaactgccgacg
accggttggctgcgtcgctatcgcgtgcgcgcccatggtgaggtagaccaggctgcgctc
gacaagctgaaggaaggcattgccgtcgacggcgtcctctacggcgcgatcgacgcaacg
ctcgaccgccagcagggccataatgtctggattaccgtcggattgcgggaaggcaagaac
cgcgaggtcaagaacgtcctcggcgcgctcggcctcgaggtcaaccggctgatccgcatc
tcctacgggcctttccaactgggcgatctgccggaggggcaggttgtcgaagtgcgcgga
cggatgctgcgcgaccagttggggccgcgcctgatcgaggaagcgaaggccaacttcgat
gcgccgatctacagcgatctcggtggtagcgaggagcccgaacctgtgacgactcgtgcc
gcgagccgggatgacagggagcgtaccggcggatggtcgcaggatcgttcgtcgaaacgg
caggattccagacgtgacgatcgccgcgggaagccggtatcgcgcggtgacaagcgtgac
gacggtgacttcggcgaaaagccgaagaagcgcccgcccatggggacctcacggaccgcg
aatgtgtggatggcgcccggtgcccgtccgacgacggatgccaaggggaagagaacttct
gcacgggctgaggcggaaaagctgttcgacaagcccaagcttccgagcgaccggagggtc
ctcgtgaaccgggcggaagaggacagcgactggatacgcgctgaatctcctgcgcgggaa
agcagggacggcgactttcctcgcaagcgacctgccggcgatcgacctgatcggggcgag
cgatccccgaggaccgagcgcccgttcgcggatcggctgcgaggggagggctccttccgc
gaaaagccccgcggcgaccgcaagccgcgcgaggagggagagcgtccccgtggtcgggga
tattccgatgacgccaggagtgagcgcccccgcggcgatcgtccgtttggtgaccggccc
cgcggcccacgaaccgagcaagaccgatcccgtggcgaccggccacgcggcagcaaaccg
gggggagatcgacccttcggaggcaagcccggcggcggaaaatccttcggcggcaagcca
tccggcggaaaaccgggaggcggtcgcggcaagcccggcggcggtggcggcaggcccggc
gggcgtccggcaggcggcaagcctcggacaagagggtag
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