Pseudorhizobium flavum: RFYW14_02003
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Entry
RFYW14_02003 CDS
T07144
Name
(GenBank) membrane protein
Organism
rfv
Pseudorhizobium flavum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
Baculo_PEP_C
DUF4455
DUF5082
Motif
Other DBs
NCBI-ProteinID:
CAD6607253
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All DBs
Position
1:1992611..1999126
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AA seq
2171 aa
AA seq
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MAKKTSSESMDETAFQALEDALKIDFIEDQEATRQKPASYASEARVSETKQRPSPARGEN
PASPPRSPAAEPAARAPVFEPANDASRRSSVNLLKTLEGGTMRSSLRNATIVSVLWAIGG
LGLAQLLYGAQLWGSGSIGGLIAMPGLVAILVGIIVPILLFFAFATMMARAQDMRNAARS
MAEVALRLSEPETVASERIMTVGQAVRREVSAMNEGIERTIARATELETLVHSEVNALER
SYTDNELRVRGLVHELGAERDAIVNHAERIRSSIVGAHEQLKEELSLATEEIAVRLATSG
EAFASLIDTRAAALTEKTNAAGEALGSLLAAKADELVRTLGSSGVALASEFDERLENLSM
TLAQRGQALLGEFETRASTLDASTERLNAALADRTRQLNETLVARTREITDGLAEGERSI
TGSLEAVLTSLNKALDDKGSAFRQSLKSAADDAVMDLDLRSGLFEERLQATVGQLSTTFD
NGLDALTTAFDQRAGSLDSKLMDSLARINETVATGSESIEGILSSSIAQIGNTLTEQSLA
LATALGTGQDVLDSMLEDRSREFSEALAARTTEITGAMGTSRETIEAVLSERSSALIEAL
NETQGKFERTVGDRSESVIAALTAGQDRFTETLDAKTAAIESVVADAPQRLASLLDERAA
TIARHLQEGEEKIGSGLDQRMDNLAQTLSASGDRIGELLDDKTMDISTAFALGEDRIAGI
LDGLADAPERLAATMDERAAQIARNIEEGSLRLGEGLDQRVTTLSQTLAANGDRIGELLD
DKTMELNTALALGEDRLTAFLNNVADTPERLAVVLDERAAQIAQNIEDGSQRLGEGLDQR
VANLTQALAQNGERIGELLDDKTMELNTAFALGEDRIAGILDSVADTPERLSSVLDDRTA
QIARHIEEGSQRLRESLDERVTTLSQTLAENGDRLGNLLDDKTMEISTAFALGEDRITGV
LTNLAETPERLSGILDERAALIARHMEEGEQRLGEGLDRRVEQLASTIASNGDRIGEMLD
DKTMELSTAFALGEDRLSGVLDEKAGALNTLATDAENRIEQSISEISVRVGDVLGDGARR
FEESVSGGAERIESVIGTGQERIAATLGLGHQQFSDTVAAANEQMEQTLGSGYERLRATL
EERSDMISAALTQSEEKISELMSEQVMSIGATVATSAGMLEMSLESQQDALRAALDGVGT
DLEQRLNSTTGVIAERLNEAAREISLSAENLSGRIEQTIGSVEAALGETGSKVEATFGGL
EARIRSELSSVTELVDGAGRDIGDTLARRTAELERISTDAHDRIAGTMDSGTARLDERLS
TMDRALTVGLDAVTRTIEGKAAGLAASLREAVSAAAAGMDDEAMRSAEMLTRTGSEFSEG
LAQRNAEFTRSIEEQSSEIVNRISETQTRLAGQAATVAQAFSEAGNAIVNKVSEADALVK
KQVTAISAALGEAEQALQERGGSLQGVLAETATELQSAMEAVDKALAARGDAIRSALDSR
TRDLNSMLASRTTELSRLIEEEARPVVEQYSEASRSAAAEIASAARESTERLVAAASESS
SRIRSENDALVDAIAARTNEALSALTQRAENTASAMLSVERSLTGNVNALIERLAESNSG
ISGLVERAAHDITSAADQALERLSGVDEKLGSTASRFSESAAHAADMVSGSSRLLENNID
RLANISGQTLNQVGGIVGRFDEHSKVLAQASELLGAAQSNLANTLDERQTALRSLSVGLV
KRSEEIEATMRNLATLVEGAFERAEGRSSQVAAHLRESLQGAFADIGRTLGETQQRADVT
AEAMRTSLLGASEEANRAVDATMANAEQRARGLSERIRSGVEGSLTDVERMLGDATSRTD
DAASHLRDLLRKSVDEAVGRFSGATDEIRRSAEQIREELDSTRAELRRGAFDLPEEAKEN
AAAMRRAVSEQIKALQDLSQLVGRSAQALEVSQPAPVRAPAPQPAPAPRAQPTAATLPPQ
PAPPARGETLPAGLRGSLSLDRTSPTRPAEPAPRGQEGGWISDLLRGASREEAPARPAAR
PTEQPAPRGGGDNRNPRHMVESLNSLSVDIARAIDHDASVDLWRRYQRGERDVFTRRLYT
LKGQQTFDEIKRKYEREPEFRTAVDRYIGDFEKLLADVARTDPDKTVTQSYLTSDTGKVY
TMLAHAAGRFS
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagaccagcagcgagtcgatggatgaaacggcgttccaggctctggaagat
gcgttgaaaatcgacttcatcgaggatcaggaggcgacacgccaaaaacctgcatcctat
gcctcggaggccagagtgtctgaaaccaagcagcgtccctcacccgcgcgtggcgagaac
ccagcatctcctccccgttcgccggcggcggagcctgcagcccgtgcacccgtcttcgag
ccggccaatgatgccagccgccgcagttctgtgaacttgctcaagacgctcgagggcggc
acgatgcgcagttcgctgcgcaatgcgacgattgtctccgttctttgggcgatcggcggc
ctcggactggcgcaacttctttacggtgcacagctgtggggttcgggttccatcgggggc
ctgatcgcaatgcccggcctcgtggcgatcctcgtgggcatcatcgttcccatcctgcta
ttcttcgccttcgccacgatgatggcccgggcacaggacatgcgaaatgccgcgcgctcc
atggcggaagtcgccctgcgcctgtccgagccggagacagtagcatccgagcgaatcatg
accgtcggccaggccgtgcgccgcgaagtttccgccatgaacgaggggatcgagcgaacg
atcgcgcgggcaaccgaactggaaaccctcgtccattcagaggtcaatgccctcgaacgc
agctacaccgacaacgaattgcgcgtacgaggtctggtccacgagctcggcgcggagcgc
gacgccatcgtcaaccatgccgaacgcatccgttcgtcgatcgtcggagctcacgagcag
ctcaaggaagaactgtcgctggcgaccgaggagatcgcggtgcggctggcgacctcgggc
gaggctttcgcatcgctgatagacacgcgcgccgccgcgctgacggaaaagaccaatgcg
gccggcgaagcgctgggctctctactcgccgcgaaggccgacgaactggtgcgaaccctt
gggtcatccggcgttgccctcgccagcgagttcgacgaacggctcgaaaacctgtcaatg
acgctggctcagcgcgggcaggcactgctcggcgaattcgagacccgggcctcgacactg
gatgccagcacggaacgtctcaatgcggcgcttgccgaccggacgcggcagctgaatgaa
acgctcgttgcacgaacccgcgagatcacggatgggctcgcggaaggcgaacgctccatc
accgggtcgctcgaagccgtcctcacatcgttgaacaaggccttggacgacaagggcagc
gcgttcaggcagagcctcaaatctgctgccgacgacgccgtcatggacctcgatctgcgc
tctgggctcttcgaggagcgcctgcaggcgaccgtcggccagctcagcacgaccttcgac
aatgggctcgacgcgctcacgacggccttcgaccagcgagccggcagccttgacagcaaa
ctcatggacagcctggcgcgcatcaacgagacggtggccacagggtccgagtccatcgaa
ggcatcctcagcagcagcattgcgcagatcggcaataccctgaccgaacagtcactggca
ttggcaacagcgcttggtaccggtcaggacgttctcgattccatgctggaggatcgcagc
cgcgagtttagcgaggctctcgctgcacgcacgaccgaaatcaccggcgcaatgggcacg
agccgcgagacgatcgaggcggttctatccgaacgcagcagcgcgctgatcgaggcgttg
aacgaaacgcaaggcaagttcgagcgtacggtgggtgatcgctcggaatccgtaattgcc
gcacttacggccggtcaggaccgcttcacagaaaccctcgacgcaaaaacggcggcaatc
gagtcggtcgtcgccgacgcaccgcagaggcttgcaagcctcctggacgagcgcgccgct
acgatcgcgcgccatcttcaggagggcgaggaaaagatcggctccggtctcgatcaacgg
atggacaatctcgcgcagacgctgtcagcgagcggcgatcggattggcgaactcctcgac
gacaagactatggatatcagcacggccttcgcgctcggcgaagaccggattgccggcatc
cttgacggcctcgccgatgctcccgagcgtctggccgcgaccatggacgagcgcgctgcg
cagatcgcccggaatatcgaggaaggaagcctgcgcctcggcgaaggcctcgaccagcgg
gtaaccactctctcgcagacgcttgccgcgaatggtgaccggatcggcgaactccttgac
gacaagacgatggagctcaacaccgctctcgcactcggcgaggaccggcttaccgccttt
ctcaacaatgtcgccgatacgccggagcggcttgcggtggtcctggacgagcgtgccgcc
cagatcgcgcagaatatcgaggatggaagccaacgcctaggcgagggccttgatcagcgt
gtggccaacctgacccaggcacttgctcagaatggcgagcggattggtgaactcctcgac
gacaagacgatggagctgaacaccgcctttgcgctcggtgaggatcgaattgccggcatt
ctagacagcgtcgccgacacgcccgagcggctttcgtccgtcctggacgatcgaactgcg
cagatcgctcggcatatcgaggaaggaagccagcgcctccgcgaaagccttgacgagcgg
gtaaccaccctctcgcagacactggccgagaatggtgatcggctcgggaatctccttgac
gataaaacgatggagatcagcacggcatttgcacttggcgaagaccgcatcactggcgtt
ctgaccaacctggccgagactccggaacgcctctccggcattctcgatgagcgggccgcc
ctgatcgcgcgtcacatggaggaaggcgaacaacggcttggagaaggcctcgatcgccgc
gttgaacaactcgcctctaccatcgcgtctaacggcgaccggatcggcgagatgctcgac
gacaagacgatggaactcagcaccgcatttgcgctgggcgaagaccggctctccggcgta
ctcgacgaaaaggcgggtgcactcaacactcttgcgactgacgctgagaaccgcatcgaa
cagtcgatcagcgagatctccgtcagggtgggcgatgtgctcggggacggcgcacgccgg
ttcgaggagagcgtatctggcggggcggagcgtatcgaatccgtcatcggcacgggtcaa
gagcggatcgccgcgacgctcggtctcggacatcagcaattcagcgacacggttgctgcc
gccaacgagcagatggaacagacactgggttccggctacgaacgcctgcgcgcgaccctg
gaagagcggagcgacatgatctccgctgccctcacccagagcgaggagaagatttccgaa
ctgatgtcggaacaggtgatgtcgattggtgcgaccgtcgccaccagcgccggcatgttg
gaaatgtccctggaaagccaacaggacgcccttcgcgcggcactcgatggcgtcggcacc
gacctcgaacaacggctgaacagcaccaccggggtcattgcggaacgcctgaacgaggca
gcacgggagatcagcctgtcagccgagaacctttcggggcggatcgagcagacgatcggc
agcgtcgaggcagcccttggtgaaactggcagcaaggtggaggcgacattcggtggcctt
gaggctcgcatccgcagcgagctttctagtgtgacggagctagtcgacggcgccggccgc
gacatcggcgacacgctcgctcggcgcaccgccgagctggagcgcatcagcaccgacgcc
cacgatcgcatcgcaggtaccatggacagcgggacggctcgcctcgacgagcgcctttcg
accatggaccgagcactgaccgtcggcttggatgcggtcacccgcacgatcgaaggcaag
gccgcaggtcttgccgccagcctccgcgaagctgtcagcgccgctgcagctggaatggac
gacgaggcgatgcgctcggcagaaatgcttacccgcacgggctccgagttcagtgaaggt
ctcgcccagcgcaatgctgaattcacccgctcgatcgaggaacagtcgagcgagatcgta
aaccgcatttcggaaacacagacccgtctcgccggccaggcggcgacagtcgctcaggct
ttttccgaagccggcaatgccatcgtcaacaaggtttcggaagccgatgctttggtcaag
aagcaggtcacggcgatctcggcagcactcggggaggctgagcaggcgcttcaggagcgc
ggcggctcattgcagggtgtccttgccgagacggcgaccgaactgcagtcagcgatggaa
gcggtggacaaggcgctggccgcacgcggtgatgcgatacgctccgccctcgacagccgt
acccgcgacctcaactcgatgctggcaagtcgcacgaccgaactgtcccgtctcatcgag
gaagaggcaaggccggtggtcgaacaatacagcgaggccagccgttccgccgccgcagaa
attgcatctgcagctcgggaaagcactgagcgcctcgtggcggccgccagcgaaagcagc
agcaggatacgcagcgagaacgatgctctcgtggatgccatcgccgcccgcacgaatgag
gccttgtccgccctcacccagcgggccgagaacaccgcgagcgccatgctgtcggtcgaa
agaagtcttacgggcaacgtcaatgcgctgatcgaacgtctggcggaaagcaattccggg
atttccggtcttgtcgaacgtgctgcgcacgacatcacctcggcagccgaccaggcgctc
gagcgcctttccggcgtcgacgagaagctcggatcaaccgccagccgcttctccgagtcc
gcggctcacgcggcagacatggtctccggctccagccgcctgctggaaaacaacatcgat
cggctggcaaacatttccggccagacgctcaaccaggtcggtggcattgtcggccggttc
gacgagcactcaaaggtgctcgcccaggcgtccgaattgctcggagccgcacaatccaat
cttgccaatacgctcgatgagcgccagacggcccttcgcagcctctccgttggtctcgtc
aagcgctccgaggaaatcgaagcgacgatgcgcaatctcgccaccctggtggaaggcgca
ttcgagcgggccgagggcagatcttcgcaggtagcggcgcatctgcgcgaaagcctccaa
ggcgcgttcgccgatatcggccgtacgcttggagagacccagcagcgtgccgacgttacc
gccgaagccatgcgaacctcgctccttggcgcaagcgaagaagccaaccgggcggttgac
gccaccatggccaacgccgaacagcgtgcccgcggtctctcggagcgcatccgaagcggc
gtggagggctcgcttacggatgtcgagcgcatgctgggagacgcgaccagccgcacggac
gacgctgcctcccatctccgcgacctcctgcgcaaatcggtggatgaggctgtcggccgc
ttctccggcgcaactgacgagatccgccggtctgccgagcagatccgcgaggaactggac
agcacccgagcggaactgcggcgtggagccttcgacctgccggaagaagccaaggagaac
gctgcggctatgcggcgcgcggtgtcggagcagatcaaggcgctgcaggacctgtcgcaa
ctggttggccgttcggcacaggcactcgaagtatcgcagccggcgccggtgcgcgcccct
gcacctcagcccgctccagcgccacgcgcccagccgacagcggcaaccctgccgccacaa
ccggctcctccggcccgtggggagaccctgcccgccggattacggggcagcctgagcctc
gaccgcacttcgcccacgcggcctgcggaacctgctcccaggggacaggaaggtggctgg
atctccgatctgctgcgcggcgcttcgcgtgaggaagcccctgcccgaccggccgcgcgg
ccgaccgagcagccagcacctcgcggcggtggcgacaatcgcaatccgcgccacatggtc
gaatcgctgaactcattgtcggtcgatatcgcccgagccatagaccacgacgcgtccgtg
gatctctggcgccgctatcagcgtggcgagcgcgacgtgttcacccgccgcctctacacg
ctcaagggccagcagaccttcgacgagatcaagcgcaaatacgagcgcgagccggagttc
cgtacggcggtcgaccgctatatcggcgatttcgaaaaactactcgcggacgtcgcccgg
acggatccggacaagacggtcacgcagagctacctgacttccgacaccggcaaggtctac
acgatgctcgcccatgcggccggacggttcagttga
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