KEGG   Pseudorhizobium flavum: RFYW14_02223
Entry
RFYW14_02223      CDS       T07144                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rfv  Pseudorhizobium flavum
Pathway
rfv00470  D-Amino acid metabolism
rfv00550  Peptidoglycan biosynthesis
rfv01100  Metabolic pathways
rfv01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rfv00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RFYW14_02223
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RFYW14_02223
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RFYW14_02223
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rfv01011]
    RFYW14_02223
Enzymes [BR:rfv01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     RFYW14_02223
Peptidoglycan biosynthesis and degradation proteins [BR:rfv01011]
 Precursor biosynthesis
  Amino acid ligase
   RFYW14_02223
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 GARS_A ATP-grasp_3 NAD_binding_8 ATPgrasp_ST TTL
Other DBs
NCBI-ProteinID: CAD6609574
LinkDB
Position
1:complement(2212710..2213636)
AA seq 308 aa
MSDKHVAVLMGGFSSERPVSLSSGAACAQALEAEGYRVTRVDVDRNVSGALSDLRPDVAF
NALHGPFGEDGTIQGVLEYLQIPYTHSGVLASALAMDKGQAKHVAKAAGIPVAEARVMSR
FDIGNRHPIEPPYVVKPVREGSSFGVVIVKADQSHPPQVLSSDEWRYGNEVMVERYVHGR
ELTCGVMGDTALGVTEVVPTGNAFYDYDAKYAAGGSTHILPAQISSNVYQKIQSLALKAH
QAMGCRGVSRSDFRYDDRVSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGLSFGDLVRWM
VEDASCLR
NT seq 927 nt   +upstreamnt  +downstreamnt
atgagtgacaagcatgtggctgttctgatgggagggttttcctccgagcggcccgtgagc
ctgtcttccggggcggcttgcgcccaagccctcgaagccgaaggctaccgtgtcacgcgc
gtcgatgttgatcgcaacgtctccggcgctctttccgatcttcgtccggatgtagctttc
aatgccctccacggccccttcggcgaggatggcacgatccaaggcgtcctggagtatctg
cagatcccttacacgcactccggtgtccttgcgtcggcgctcgccatggataaggggcag
gcgaagcatgttgccaaggccgcaggtattccggtcgccgaggcgcgggtgatgagtcgc
ttcgatatcggtaatcgccacccaatcgagccgccttatgtcgtgaagcctgtacgcgaa
ggttcgtccttcggcgtggtcatcgtcaaggcggaccaatcccatccgccgcaagttctg
tcgtcggatgagtggcgctacggcaacgaggtgatggtcgagcgctatgtccatggtcgc
gagctgacctgcggcgtcatgggcgatacggcgctcggcgtaaccgaggtcgtgccgacg
gggaatgccttctacgattatgatgcgaagtacgcagcgggcggatcgacgcatattctt
cctgcgcagatttcatcaaatgtttaccagaaaatccaatccttggccctcaaggcgcat
caggcgatgggctgccgcggcgtgagtcgatccgatttccgctacgacgaccgcgtttcc
gaagacggcgaggtgatctggctggaggtcaacacccagcccggcatgaccccgacttcg
ctggtgcccgaaatggccgcgcatgccggcctctcgttcggtgatctcgtccgttggatg
gtggaggacgcatcgtgtctgcgttga

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