Rubrivivax gelatinosus: RGE_02660
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Entry
RGE_02660 CDS
T01803
Name
(GenBank) alpha amylase catalytic region
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00500
Starch and sucrose metabolism
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RGE_02660
Enzymes [BR:
rge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
RGE_02660
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
Glyoxalase_6
Motif
Other DBs
NCBI-ProteinID:
BAL93611
UniProt:
I0HKS4
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All DBs
Position
complement(280413..282020)
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AA seq
535 aa
AA seq
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MCTSTRAFRLLAVAAAAALLVACGGGGGGGSDEPLPSVDTSSVAAADPGSTLDAGWQRRG
IAQIFVRSYQDSDGDGKGDLKGLISRLDYLKSLGVGGIWLMPITASQDEDHGYAVKDYRA
VESDYGTLADLDALVAAAHARGLGVIVDYVMNHSAAQHPAFLNSRAGASNAFRGWYVWQS
SHPSGWSIYGSDPWRAYDGSWYFAPFWDQMPDFNLTNTAVVDWHHDNLRFWLNRGVDGFR
FDAVGNLVENGPSAWENQPQNHVLMASVRDLVGGYQNRYMVCEGPSDPAGYAASCGSAFA
FGHQSDLIAAAQGDTTAIAAVAAYPSTAPAGAATFLSNHDSFAGQRPYDQLGGNVAQYKL
AAATYLLQPGIPFVYYGEEIGMAGASSLSGDPKLRTPMSWTPSGGFTTGTPYRAKSANVS
GYNVEAEAADAGSLLAFYKTMLALRGSRPSISAGDYQQPAASGTLLSFQRTQGSERTLVV
LNYGATSATATVTGLPANATLASLYPSGDAGATASAAGQASITMAARSVRVFDVR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacctccacccgcgccttccgccttcttgccgttgccgccgcggcggccctgctc
gtcgcctgcgggggcggcggcgggggtggcagcgacgagccgctgccgagcgtcgacacc
agcagcgtcgccgccgccgacccgggcagcacgctggacgccggctggcagcgccgcggc
atcgcccagatcttcgtgcgcagctaccaggacagcgacggcgacggcaagggcgacctg
aaggggctgatttcgcggctggactacctgaagtcgctgggcgtcggcggcatctggctg
atgccgatcaccgccagccaagacgaggaccacggctacgcggtgaaggactaccgcgcc
gtcgagagcgactacggcacgctggccgacctggacgcgctggtcgccgcggcgcacgcg
cgcggcctgggcgtcatcgtcgactacgtgatgaaccacagcgccgcccagcacccggct
ttcctgaactcgcgcgccggcgcgtccaacgcctttcgcggctggtacgtctggcagagc
tcgcatcccagcggctggagcatctacggcagcgacccctggcgcgcctacgacggcagc
tggtacttcgcgccgttctgggaccagatgcccgacttcaacctgacgaacacggcggtc
gtcgactggcaccacgacaacctgcgcttctggctcaaccgcggcgtcgacggcttccgc
ttcgacgccgtcggcaacctcgtcgagaacggcccgtcggcctgggagaaccagccgcag
aaccatgtgctgatggcttcggtgcgcgacctggtcggcggctaccagaaccgctacatg
gtctgcgaaggcccgagcgacccggccggctacgccgcgagctgcggcagcgccttcgcc
ttcggccaccagagcgacctgatcgccgcggcgcagggcgacacgacggccatcgccgcc
gtcgccgcctatccgagcacggccccggccggcgcggcgaccttcctgtccaaccacgac
agcttcgccggccagcgcccgtacgaccagctcggcggcaacgtcgcgcagtacaagctc
gccgccgccacctacctgctgcagcccggcattcccttcgtctactacggcgaggagatc
ggcatggccggggcctcgtcgctgagcggcgaccccaagctgcgcacgccgatgagctgg
acgccctcgggcggcttcacgaccggcacgccgtatcgcgccaagtcggccaacgtctcg
ggctacaacgtcgaggccgaggcggcggatgccggctcgctgctggccttctacaagacg
atgctggcgctgcgcggctcgcggccgtcgatctcggcgggcgactaccagcagccggcg
gccagcggcacgctgctgagcttccagcgcacgcagggcagcgaacgcactctggtcgtg
ctgaactacggcgccaccagcgcgacggcgaccgtcaccggcctgccggccaatgcgacg
ctggccagcctgtacccgagcggcgatgccggcgcgacggcgagcgccgccgggcaggcc
tcgatcacgatggccgcacgctcggtgcgcgtcttcgacgtgcgctga
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