Mediterraneibacter gnavus: RGna_04375
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Entry
RGna_04375 CDS
T06719
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00920
Sulfur metabolism
rgn01100
Metabolic pathways
rgn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
RGna_04375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_04375
Enzymes [BR:
rgn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
RGna_04375
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
RGna_04375
DNA repair and recombination proteins [BR:
rgn03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
RGna_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Raf1_HTH
VAPB_antitox
Motif
Other DBs
NCBI-ProteinID:
QHB22783
LinkDB
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Position
complement(842277..843236)
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AA seq
319 aa
AA seq
DB search
MKIVLSDILKGKKRIALSGHVRPDGDCVGSSMGLYLYLTEQFPEIEVDLYLEKIPASFSI
ISRTEEIRHTLSEETAYDLFICLDCGDEQRLGPFAPLLRQAAHTVCIDHHVSNDAFAELN
YIRPEASSTSELVYTLLEDEKISKACAEALYMGIAHDTGVFQYSCTSPETMEAAAQLLRK
GIDGSEIIEKTYFEKTYIQNQILGRALLESMLVLEKQVVVSVVSRKEMEFFEAVPSDLEG
IVAQLRQTKGVEVAIFLHETDTREYKVSLRSKGKVNVSSIAQYFGGGGHVRAAGVTMKGS
AHDVINNLLRQITLQLKEA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtattatctgatattttgaagggaaagaagcggatcgcgctctccggtcat
gttcggccggacggagactgtgtaggatcgtcgatgggattgtacctgtatcttacagag
cagtttccggaaatagaagttgatctgtatctggaaaagataccggcatccttttccata
atctcgcgtacagaggaaatcagacatacactttcagaagagacggcatatgatctgttt
atctgtctggactgtggggacgaacagcggctcggaccgtttgcaccgttacttcgacag
gctgcacatacggtttgtatcgatcatcatgtgagcaatgatgcatttgcagagttaaat
tacattcgcccggaggcaagttctacatcagagctggtttatacacttctggaagatgag
aagatcagtaaggcatgtgcggaagcactgtatatgggaatcgcacatgatacgggagta
tttcagtactcctgtacctctccggagacgatggaggcagccgcacagttgcttagaaaa
ggaattgacggcagtgagattatcgaaaaaacttattttgagaagacctatatccagaat
cagatcttagggagagcgcttttagaaagcatgctggttttagaaaaacaggtggtcgtt
tctgttgtatccagaaaagagatggaatttttcgaggcagttccaagcgatctggaggga
atcgtggctcagcttcggcagacaaaaggtgtggaagtggcgatttttctgcatgagacg
gacacccgggagtataaggtcagtctgcgttccaagggcaaagtcaatgtaagcagtatt
gctcagtattttggtggaggcggtcatgtgcgtgcagcaggggttacaatgaaaggttct
gcgcacgatgtgatcaacaatctgcttagacagattacattgcagctaaaagaggcatag
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