Mediterraneibacter gnavus: RGna_08510
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Entry
RGna_08510 CDS
T06719
Name
(GenBank) glycoside hydrolase family 13 protein
KO
K01208
cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:
3.2.1.54
3.2.1.133
3.2.1.135
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00500
Starch and sucrose metabolism
rgn01100
Metabolic pathways
rgn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RGna_08510
Enzymes [BR:
rgn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.54 cyclomaltodextrinase
RGna_08510
3.2.1.133 glucan 1,4-alpha-maltohydrolase
RGna_08510
3.2.1.135 neopullulanase
RGna_08510
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_N
GHL10
GHL6
hDGE_amylase
Glyco_hydro_66
DUF3459
Motif
Other DBs
NCBI-ProteinID:
QHB23531
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Position
complement(1662771..1664525)
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AA seq
584 aa
AA seq
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MQFAGIFHKTSEQMSYALNENELIVNLRTGYDVRRVFIHYGDPFESGILGGNEKWTGKRE
EICFKKRLRHQLWWTTTLVPKYKRCKYYFELHTEEEVWYYFEDGFLTEEQMQMDGRMLQC
FTVPWMNPADINVTPDWVNETVWYQIFPDRFCRGADTKEEAGVTKWRTGTVTNEERFGGN
LNGIREKIPYLEGLGITGIYLNPIMKAESNHKYDTTDYTVIDPHFGTEEEFKDLVEEAHQ
HGIRIMVDAVFNHCGRKFAPWLDVLEKKEKSAYADWFMIHDWETVEKRADTRDGRFYSFA
FTDGMPKLNTNNEEVIQYFCKICEDWIRKFDIDGIRFDVGNEVSHRFLKKIREHLKQMKP
DLYLLGEIWHDASQWLLGDEYDSVMNYPLMSGIHDFFLDRGMEKEEFEYMVNRCYTMYMQ
QSNNVMFNLLDSHDTQRLMSRFDDLDLFYQQLAVLFTMPGSACIYYGTEIAMEGGFDPDC
RRCMPWQELDSSENQEKIQIMQKLIAMRKQEAACKSLYFHFPNEYEKRRLVEYIKLDQDG
NQLEVLLNCSEESVSVKEEGEVLFSRRFEQGVLKKNGTLIRRKK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgctggaatttttcataaaacatcagaacagatgagttatgcgttaaatgaa
aatgagctgatcgtaaacttaagaacaggatatgatgtcagacgggtattcattcattat
ggagatccgtttgaatcgggaatccttggcggaaacgagaaatggaccggaaagagagag
gaaatctgttttaagaaacgtttgcgtcaccagctctggtggacaacgacattggttcca
aagtataaacgctgcaaatattattttgaattacatacagaggaagaagtctggtattat
tttgaggatggatttctgacagaagaacagatgcagatggacggaaggatgctgcagtgc
tttaccgtaccgtggatgaatcctgcggatattaatgtgacaccagactgggtcaacgag
acagtatggtatcagatttttccggaccggttctgcaggggagcagatacgaaggaagag
gccggtgtgacgaagtggcgcactggtactgtgaccaatgaagagaggtttggcggaaat
ttaaatggaatccgggaaaaaattccttatctggaagggctcggaatcacgggaatctac
ctgaatcccattatgaaagcagaatccaaccacaaatatgacaccacagattatacggtg
atcgatcctcattttggaacggaggaagaatttaaagatctggtagaagaggcacatcag
catgggattcggatcatggtggatgctgtgttcaatcattgtggaagaaagtttgcacca
tggctggatgttctggagaaaaaagaaaaatctgcgtatgcagactggtttatgatccat
gactgggaaacagtcgaaaaacgggcagatacgagagacggacggttttattcatttgca
tttactgatggaatgccaaagctgaatacaaataacgaagaagtaattcaatacttctgt
aaaatatgcgaagactggatccgcaaattcgatattgacggaatccggtttgacgtggga
aatgaagtttcccaccgttttctgaaaaaaatccgggagcatttaaaacagatgaaaccg
gatctgtacttactgggtgaaatctggcatgatgcaagtcagtggcttctgggagatgag
tacgattctgtaatgaactatcctctgatgagcggaatccatgatttcttcttagatcgg
ggaatggaaaaagaagaatttgagtatatggtgaaccgctgttatacgatgtatatgcag
cagagcaacaatgtgatgttcaatcttctggattctcatgacacgcagcgtctgatgagt
cggtttgatgatctggatctgttttaccagcagcttgccgtgttgtttacaatgccggga
agtgcctgcatttattatggaacagagattgcaatggaaggcggttttgatccggactgc
cgcagatgtatgccgtggcaggaactggattcatccgaaaaccaggaaaaaatccagatc
atgcaaaagctgatcgcaatgcggaaacaggaagcagcctgcaaaagtctgtatttccat
tttccgaatgagtatgagaagagacgtcttgtggagtatatcaaactggatcaggacggc
aatcagctggaagtactcttaaactgttctgaggaatcggtatcagtaaaagaagaggga
gaagttttgttttcccgcagatttgagcagggtgtattgaagaaaaacggaactttgatc
agaagaaagaaataa
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