KEGG   Rhizobium grahamii: FZ934_06100
Entry
FZ934_06100       CDS       T06285                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rgr  Rhizobium grahamii
Pathway
rgr00010  Glycolysis / Gluconeogenesis
rgr00020  Citrate cycle (TCA cycle)
rgr00260  Glycine, serine and threonine metabolism
rgr00280  Valine, leucine and isoleucine degradation
rgr00310  Lysine degradation
rgr00380  Tryptophan metabolism
rgr00620  Pyruvate metabolism
rgr00630  Glyoxylate and dicarboxylate metabolism
rgr00640  Propanoate metabolism
rgr00785  Lipoic acid metabolism
rgr01100  Metabolic pathways
rgr01110  Biosynthesis of secondary metabolites
rgr01120  Microbial metabolism in diverse environments
rgr01200  Carbon metabolism
rgr01210  2-Oxocarboxylic acid metabolism
rgr01240  Biosynthesis of cofactors
Module
rgr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rgr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rgr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:rgr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FZ934_06100 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FZ934_06100 (lpdA)
   00620 Pyruvate metabolism
    FZ934_06100 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FZ934_06100 (lpdA)
   00640 Propanoate metabolism
    FZ934_06100 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FZ934_06100 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FZ934_06100 (lpdA)
   00310 Lysine degradation
    FZ934_06100 (lpdA)
   00380 Tryptophan metabolism
    FZ934_06100 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FZ934_06100 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rgr04147]
    FZ934_06100 (lpdA)
Enzymes [BR:rgr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FZ934_06100 (lpdA)
Exosome [BR:rgr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FZ934_06100 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 FAD_oxidored FAD_binding_3 GIDA HI0933_like DAO Thi4 AlaDh_PNT_C 2-Hacid_dh_C XdhC_C 3HCDH_N
Other DBs
NCBI-ProteinID: QFY60035
UniProt: A0A5Q0C455
LinkDB
Position
1214920..1216365
AA seq 481 aa
MAENYDVIIIGSGPGGYVAAVRASQLGLKTAIVEREHLGGICLNWGCIPTKALLRSAEVL
DHANHAKDYGLVLEGKMSADVKAVVARSRGVSARLNGGVGFLMKKNKVDVIWGEATITKP
GEIVVGKSSKPVVEPQNPVPKNIKGEGTYNAKHIIIATGARPRALPGIEPDGKLIWTYFE
AMKPAALPKSLIVMGSGAIGIEFASFYRSMGVDVTVVEVMPTIMPVEDVEVTAIARKQLE
KRGMKIITSAKITKVEKAADSITAHVETADGKVQQIVADRMISAVGVQGNIENLGLEAVG
VKTDRGCVVIDGYGKTNIAGIYAIGDVAGPPMLAHKAEHEGVVCVEKIAGLPNVHPTDKG
KVPGCTYCHPQVASVGLTEAKAKELGRDIRVGRFSFAANGKAIALGEDQGLCKVIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSETMKEAVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctgagaattacgacgtcatcatcatcggttcgggccccggcggctatgtcgccgcc
gtgcgcgccagccagcttggcctcaagaccgcgatcgtcgagcgcgagcacctgggcggg
atctgcctgaactggggctgcatcccgacgaaggcgctgctgcgctcggccgaggttctc
gaccacgcaaaccacgccaaggattacggcctcgtcctcgagggcaagatgtcggccgac
gtcaaggctgtcgtcgcccgctcgcgcggcgtctcggcgcggctgaacggcggtgtcggc
ttcctgatgaaaaagaacaaggtcgatgtgatctggggcgaagccacgatcaccaagcca
ggcgagatcgtcgtcggcaagtcctccaagcccgtcgtagagccgcagaacccggttccg
aagaacatcaagggcgagggcacctacaatgccaagcacatcatcatcgccacaggcgcc
cgcccgcgcgcgctgccgggcatcgagcccgatggcaagctgatctggacctatttcgag
gcgatgaagccggcagcgctgccgaagtcgctgatcgtcatgggctcgggtgcgatcggt
atcgaattcgccagcttctaccgctcgatgggcgtcgacgtcaccgtcgtcgaggttatg
ccgacgatcatgccggtcgaggacgtcgaagtcacggcgatcgcccgcaagcagctcgaa
aagcgcggcatgaagatcatcaccagcgccaagatcaccaaggtcgagaaggccgccgac
agcatcaccgcgcatgtcgagacagcggatggcaaggtccagcagatcgttgctgaccgc
atgatctcggccgtcggcgtgcagggcaacatcgaaaatctcggcctcgaagccgttggc
gtcaagacggatcgcggttgcgtcgtcatcgacggctacggcaagaccaacatcgccggc
atctatgccatcggcgacgtcgccggcccgccgatgcttgcgcacaaggccgagcatgag
ggcgtcgtctgcgtcgaaaagatcgccggcctgccgaacgtccacccgaccgacaagggc
aaggttcccggctgcacctactgccacccgcaggtcgcctccgtcggtctcacggaagcc
aaggccaaggaattgggccgcgacatccgcgtcggccgcttctcctttgccgccaacggc
aaggcgatcgcgctcggtgaggaccagggcctctgcaaggtgatcttcgacaagaagacc
ggcgaactgctcggcgcccacatggtcggcgccgaagtcaccgaactgatccagggcttc
gtcgtcgccatgaacctggagacgaccgaggaagaactgatgcacaccatcttcccgcat
ccgactgtttccgaaacgatgaaggaagcggttctggatgcctatggtcgtgtcctgaac
gcttga

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