Piscinibacter gummiphilus: A4W93_15950
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Entry
A4W93_15950 CDS
T04831
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
rgu
Piscinibacter gummiphilus
Pathway
rgu02020
Two-component system
rgu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A4W93_15950
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A4W93_15950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rgu03021
]
A4W93_15950
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rgu02035
]
A4W93_15950
Transcription machinery [BR:
rgu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4W93_15950
Bacterial motility proteins [BR:
rgu02035
]
Flagellar system
Flagellar assembly proteins
Stator
A4W93_15950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
LexA_DNA_bind
HTH_37
HTH_38
HTH_28
HTH_23
HNH_repeat
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
ARN21272
UniProt:
A0A1W6LAJ5
LinkDB
All DBs
Position
complement(3569500..3570222)
Genome browser
AA seq
240 aa
AA seq
DB search
MDLHAGYAEVQDVAAHAGLSPADEQRHLLAYAPLVKRIARQLNSQASGAMDRDDMEQIGL
MGLLEALRRYGEPDAQFGGFAALRIRGAILDELRRQDWRPRAVRQESHRVRDAVRELTRR
LGREPSEAEIRTALGLSADAYQEHLLAENAETIASFDELVSDLVQMPSHGANPEEQMTVR
RSIEQGLKALDEREQRVIQLYYEHELSYKEIAAVLGLTDARVCQLNKGALKKMKALLEKN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcacgccggttacgctgaagtccaggacgtcgccgctcacgcggggctgagc
cctgccgacgagcagcggcacctgctcgcgtacgcgcccctggtcaagcgcatcgcccgg
cagctcaactcgcaggcctccggcgcgatggaccgcgacgacatggagcagatcggcctg
atgggcctgctcgaggcgcttcgccgctacggcgaacccgacgcgcagttcggcggtttt
gccgcgctgcggatccgcggcgccatcctcgacgagctgcgccgccaggactggcgcccg
cgcgccgtgcgccaggaaagccaccgcgtgcgcgacgccgtgcgcgaactcacgcgccgc
ctgggccgcgagccgtccgaggcggagatccgcacggccctcggcctgtccgccgacgcc
taccaggaacacctcctggccgagaacgccgaaaccatcgcgagcttcgacgaactcgtg
agcgacctggtgcagatgccctcgcatggcgcgaacccggaagaacagatgacggtccgc
cgctcgatcgagcagggcctgaaggcgctggacgaacgcgagcagcgcgtgatccagctc
tattacgagcatgagctcagctacaaggaaatcgccgcggtgctcggcctgaccgacgcc
cgcgtgtgtcaactcaacaagggagcgctcaagaagatgaaggcgctgctcgaaaagaac
tga
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integrated database retrieval system
