Rodentibacter haemolyticus: IHV77_11230
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Entry
IHV77_11230 CDS
T07810
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
rhae
Rodentibacter haemolyticus
Pathway
rhae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IHV77_11230 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhae03400
]
IHV77_11230 (recB)
Enzymes [BR:
rhae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IHV77_11230 (recB)
DNA repair and recombination proteins [BR:
rhae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IHV77_11230 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
ResIII
AAA_12
AAA_25
DUF4358
Motif
Other DBs
NCBI-ProteinID:
QPB42451
LinkDB
All DBs
Position
2355438..2359061
Genome browser
AA seq
1207 aa
AA seq
DB search
MKKTTPLNPVTLPLNQVNLIEASAGTGKTYTIGSLYLRLLLQAGEQNFSRPLNVEEILVV
TFTEMATEELKQKIRERITDAIQKLSEYAETKEITAFKNDEFLIALCENIDNLPLAIQRL
KLAEQNMDLAAIFTIHGFCRRMLMQYAFNSGVHFNLELLKDQSDLLKQFANEFWREHFYP
LPFDEANFIANELGSPDEVLEILKSDLGKDVQVEIDNPHSLSLPIGEFLQRNLSGYLQAV
DELKAFWLQQVDKIGELITEEISKTYPKGSPKKLNRRVYQAGRLKNWFAQINKWANHTRD
YHIHQLLKDYFLQSVLAQKGEEGAAPFQHPVFVELEDRVQELVDPALLKKITLYHYRQGI
WQKLLEYKQNHQEKSFDDLLRLLCEALHNEQGDNLAEMIRFQYPFAMIDEFQDTDAQQYR
IFSKIYRDHRVKNTGFIMIGDPKQAIYRFRGADIFTYLKAAQQADERFNLTKNYRSQKQV
VEGVNALFDFNDLPFIYDNIKFSPVGAREDHYRFYLNGECEPAYRFYLTENDGKNLDKTA
LARTCAISIQHWLKSAVENQAVFKAEKDSKTLQAADIAVLVRDKNEAELVKSELQQLGIA
SVYLSDQNSVFDSRVAKELVLVLKACLNVAERPILNAIATALFGLNAAEIHQIHHNETDW
QRRADSFAQYQQMWKRQGVLPMLHQLLLEQGIAERLLSLPKGERDLTDFLHLAEILQQAA
TLNESEAALLSWFEKQIQGEGRQEAQIRLESERQLVKIVTIHKSKGLEYDLVWLPFLAVP
SRDPSKSGNAAKEMNLYYSKERDTMIWDMQNRHLDALNQETFAEELRLLYVALTRAKYQM
AFALPTQFDKKWNPFLYVLTQGEIGEKLELAENYQTAPLLDQFKAKMKAVMIESAETLIK
LPPLFFGRTEEGLAAAEFSGEIEQDWRITSFTGIEQAHRRAHYLSESAVKKSLVFDEAKD
YDISSGILTALSEQKNADILGLPRGTQVGTALHRYLEKNDFSLLSNDAAITKLCQELQLD
EAFIKPLQQWFERILQTPFSEAVPLKLAGVAKTDCIKEMSFYLSIRDHFDVEIFNRALKN
YHRLPSEKLQFEDIQGMVRGTIDLVFRHQGKYYLLDYKSNFLGETQTDYSPEALEKAMLH
HHYDWQYLLYTLALHRYLKTVDRDYDYERHFGGVFYLFLRGMNGKAQSGVFFDRPTKQLI
DELEEAF
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaacgccgttaaaccctgtcacattgcctttaaatcaagtcaatcttatt
gaggcttcagccggtacgggaaaaacttatactatcggctcgttatatctccgacttttg
ttacaagccggcgaacaaaatttttctcgtccattgaatgtggaagaaatcttagtggta
acgtttactgaaatggctacggaagaattaaagcaaaaaattcgtgaacgtattacggat
gccatacaaaaattatcggaatatgcggaaacgaaagaaatcaccgcctttaaaaatgat
gaatttctgatcgcactttgcgaaaacattgataatttaccgcttgccattcaacgttta
aaacttgccgaacaaaatatggatcttgccgctattttcactattcacgggttttgtcgg
cgaatgttaatgcaatatgcgtttaattccggtgttcacttcaacttagaattgttaaag
gatcaatcggatttgctaaaacaatttgctaatgaattttggcgtgaacatttttatccg
ttgccttttgatgaagcgaattttattgcaaatgaattgggctcgcctgatgaggtgttg
gaaattttaaaatccgatttgggcaaagatgtgcaggtggaaatagacaatccccactct
ttatctttaccgattggtgagtttttacagagaaaccttagcggatatttgcaggcggtt
gatgaattgaaagcgttttggttacaacaagtagataaaatcggcgagcttatcaccgaa
gaaatttccaaaacctacccgaaaggttcgcctaaaaagttaaatcgaagagtatatcaa
gccggcagattaaaaaattggtttgcacagattaataaatgggcaaaccatactcgggat
tatcatattcatcaacttttaaaggattattttctgcaatccgttttagcgcaaaaaggc
gaggagggagcagctccttttcaacatcccgtttttgtggaattggaagatcgggtgcag
gaactcgttgatccggcattactcaaaaaaatcaccctttatcattatcgccaaggcatt
tggcaaaaactccttgaatataaacaaaatcatcaggaaaaatcttttgatgatttattg
cgtttactttgtgaagccttgcacaacgagcaaggcgataatctggcggaaatgatccgc
tttcaatatcctttcgcaatgattgatgagtttcaagatacggatgcgcaacaatatcgc
attttctcaaaaatatatcgggatcatcgggtgaaaaataccggttttattatgataggt
gatcctaagcaggcgatttatcgttttcgcggtgcggatattttcacttatttaaaagca
gcacagcaggcggatgaacgctttaacttaaccaaaaactaccgctcgcaaaagcaggtt
gtagaaggggtaaacgcgctatttgatttcaatgatttaccgtttatttacgataatatt
aaattttctcctgttggcgcacgtgaggatcattaccgattttatttgaatggcgaatgc
gagccggcttaccgtttttatttgacggaaaatgacggtaaaaatttagataaaaccgct
ttggcgcgcacttgcgccatttcaattcaacattggttaaaaagtgcggttgaaaatcag
gcggtttttaaagctgaaaaggacagcaaaacgctgcaagctgcggatattgccgtattg
gtgcgtgataagaatgaagccgaattagtcaaaagtgaattacagcagttgggcatcgct
tccgtttatctttccgatcaaaactcggtatttgatagccgcgtggcaaaagaactggtg
cttgtgttaaaagcctgtctgaatgtggctgaacgcccgattttaaatgcgattgcgacc
gcacttttcggcttgaatgcggcggaaattcaccagattcatcataatgaaacggattgg
caacgcagggcggatagttttgctcaatatcaacaaatgtggaaacgacaaggcgtgttg
ccgatgttgcatcaacttttgttggaacaaggcattgcggagcgattattaagcttacct
aagggagagcgggatttaacggatttcttgcatttggctgaaattcttcaacaagcggca
accctcaatgaaagcgaagcggcattgctaagttggtttgaaaaacaaattcaaggcgag
ggcagacaagaggcgcaaattcgtttggaaagcgagcgtcagctggtaaaaatcgtgact
atccataaatccaaagggttggaatatgatttggtttggttgccgtttttagccgtgccg
agccgtgatccaagtaaatcgggtaatgcggcaaaagaaatgaatctttattattccaaa
gaacgggatacgatgatatgggatatgcaaaatcgccatttagatgccctgaaccaagaa
acttttgcggaagaattacgcttgctttatgtggcgctgacaagggcaaaataccaaatg
gcatttgccttgcctacgcaatttgataaaaaatggaatccgttcctttatgtgctgacg
caaggcgaaatcggtgaaaaattggaattagcggagaactaccaaacggcaccgttgctc
gatcaatttaaggcaaaaatgaaggcagtgatgattgaatcggcagagacattaattaaa
ttgccgcctttgttttttggcagaacggaagaggggcttgctgcggctgaatttagcgga
gagatcgagcaagattggcgtattaccagtttcaccgggattgaacaagcgcaccgtcgg
gcgcattatttgagcgaaagtgcggtaaaaaaatccttggtttttgatgaagcgaaagat
tacgacatttcttccggaatattgaccgcactttcggaacaaaaaaacgcggatatttta
gggcttccccgtggtacacaagtcgggacggcgctacatcgttatttagaaaaaaacgat
tttagtctgttaagcaatgacgcggctatcacaaagctgtgtcaagaattacaacttgat
gaggcttttatcaaaccgttacaacaatggtttgagcgaattttgcaaacgcctttctcc
gaagccgtgccgctgaaacttgccggagtggcgaaaacggattgtattaaagaaatgtca
ttttatttatcaatccgcgatcattttgatgtggaaatcttcaatcgggctttgaagaac
tatcatcgactaccgagtgaaaaattgcaatttgaagatattcaaggaatggtacgggga
actattgacttagtattccgccatcaaggtaaatattatttgttggattataaatcgaat
ttccttggcgaaacgcaaacggattattcacccgaagcgcttgaaaaggcgatgttacat
catcactatgattggcaatatttgctttataccttggcattacatcgttatttaaaaacc
gtggatcgtgattatgattacgaacgtcattttggcggcgtgttttatcttttcttgcga
ggtatgaacggcaaagcgcaatccggcgtattttttgatcgcccaacgaagcaactcatt
gatgaattagaggaggcgttttaa
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integrated database retrieval system
