Rhodococcus sp. B7740: NY08_3016
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Entry
NY08_3016 CDS
T03776
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor
Organism
rhb
Rhodococcus sp. B7740
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_4
PAS
PAS_9
PAS_3
PAS_8
PAS_11
PAS_7
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AJW41026
UniProt:
A0A0D5ADT6
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Position
complement(3099324..3100616)
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AA seq
430 aa
AA seq
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MSFCSVVQNRAQSVTSSIQRWFMTVTRNTSNELMRRAVDRLPSMIGYWDSSLGNVFANRV
YADYFGIEPQDLVGQHISTLLGEALYELNLPYITGVLAGEQQQFDRTLIDVNGAVRVFQA
TYVPDLVDGVVVGFTELVVDVSARAEIERERDRAIRLFQNVMENAPIGKAVMTRDGRWLQ
VNKALCELLGYSAEELQQKTFRDLTHPDDIPLADEHLKGLADGTLTKVASEKRYIRKDGA
TIWVQRNVTVVRDAEAGDMIIAQIQDITARKNAEATLERQALIDDLTSLGNRRRLMAELN
SLKELSSDRPVGVLFVDVDAFKSINDRFGHVVGDRVLAAIGRRILDNIRAEDIACRIGGD
EFVALLHSAKSAEGVERLADRVRGLLAGPYDIDGTSIPVSVSVGWSWEPTTDPDHLLRIA
DERMYSSKRA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctgtagcgtcgtgcagaatcgagcgcagtcggtcacatcgagcattcagagg
tggttcatgaccgtaactcgcaacacgtccaacgagttgatgcgtcgagccgtcgaccga
ctgccgtcgatgatcgggtactgggacagctcgctcggcaatgtcttcgccaaccgcgtg
tacgccgactacttcggaatcgaaccgcaggatctggtcggtcaacacatcagcacactg
ctcggcgaggcgctgtacgagctgaacctgccgtacatcaccggtgtcctcgccggcgag
cagcaacagttcgaccgcacgctcatcgatgtcaacggtgctgtgcgcgtctttcaggcc
acctacgtcccggatctcgtcgacggcgtcgtggtcgggttcaccgagctggtcgtcgat
gtcagtgcgcgcgccgagatcgaacgcgaacgagatcgcgcgatccggctgttccagaac
gtgatggagaacgccccgatcggcaaagccgtgatgacccgcgacggacgctggctccaa
gtgaacaaggcgctgtgcgaactactgggatacagcgcagaagagttgcagcagaaaaca
tttcgcgatctcacgcatcccgacgacatccccctcgccgacgaacatctgaagggactg
gccgacgggacgctgacgaaggtggcgtcggaaaagcggtacatccgtaaggacggagcc
accatctgggtgcagcgcaacgtgaccgtggtgcgcgacgccgaggccggtgacatgatc
atcgcgcagatccaggacatcaccgcacgcaagaacgcggaagcgactctggaacgccag
gcgctgatcgacgacctcacctcgttgggaaatcgtcgacgactcatggccgagctgaac
agtctcaaggaactgtcgagcgatcggccggtcggagtacttttcgtggacgtcgacgcg
ttcaagtccatcaacgaccgattcggccacgtcgtcggcgatcgcgtgctcgccgccatc
ggacgtcgcatcctcgacaacatccgcgccgaggacatcgcctgccgaatcggcggagac
gagttcgtggccctgctgcactccgccaaatcggccgaaggagtcgaacgcctcgccgac
cgagtccgcggactcctcgccggcccctacgatatcgacggcaccagcatcccggtatcg
gtgagcgtcggatggagctgggaaccgaccaccgacccggaccacctactgcgcatcgcc
gacgagcgaatgtattcgtccaaacgcgcctga
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