Rhodanobacter denitrificans: R2APBS1_3176
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Entry
R2APBS1_3176 CDS
T02495
Name
(GenBank) glycosidase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00500
Starch and sucrose metabolism
rhd01100
Metabolic pathways
rhd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
R2APBS1_3176
Enzymes [BR:
rhd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
R2APBS1_3176
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AGG90248
UniProt:
M4NKN1
LinkDB
All DBs
Position
complement(3326829..3328373)
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AA seq
514 aa
AA seq
DB search
MSRNAASAVLDDCDMGAFYGGTIDGVTRKIRDRWFTDLGVNTILISPIFEQIAGWVPSAG
KDFCHYAYHGYFTLDYTVMDRRFGNEADLRDLVDCAHAVGIRVLLDVVLNHPGYPEPSTF
RNVGISGWDPGWEAAEPKNFYDYMNRSSSSFNDWWGPDWVRCDLPGYSPGGCDDYTMLLH
GLPDFKTEDERFVSLPIFLRNKADTRAMDMPDTTVRGYLVKWLSDWVREYGFDGFRCDSA
RHVEPETWAQLKHACVQAKREWWEQQRDRSGATPHFWLLGEVFGHGVERSSYFDCGFDSL
LNFSFQEDIERGIHLDALYEDYAAQLHEHSDLSFVSYVSSHDTHLLDRRKIREGSAALML
APGGVLLFYGDETGRLPGAPNEQDPAQAARSPMNWGATDAQLLMHWRKLSRFRTRHPAVA
NGVHLKLFDCPYVFARLDTTGDRVLVAMAVDGYLSLPVGEMFADGQQVRDAYGGWRGVVK
DGRVSLNADGFVLLETDDGSAWYPDMDCRGRGLP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaacgcggcgtcggctgtgcttgacgattgtgatatgggtgcattttacggc
ggaactatcgatggtgtaacgcggaagattcgggatcgctggttcaccgacctcggggtg
aatacgattttaatatcgcccatttttgagcagatcgctggttgggttccgagcgcaggg
aaggatttttgtcactatgcctatcacgggtatttcacgctcgattacacggtcatggat
aggcgcttcggtaacgaagccgatctgcgcgatctggtcgattgtgcgcatgccgtcggt
atacgcgtgctgctcgatgtggtgctgaatcatccaggttatccggagccttccacattc
cgaaatgtcggaatcagtggctgggatcccggatgggaagcggctgagccgaagaatttt
tacgactatatgaatcgatccagttcatcgttcaacgattggtggggacctgattgggtt
cgctgtgacttgccaggttattcgccgggcggctgcgacgactacaccatgttgctacac
ggtcttccggacttcaaaacagaagacgagcgcttcgtatctctgcctatattcctgagg
aacaaagctgataccagggctatggatatgcccgataccaccgtgcgtggctatctcgtc
aaatggctttccgactgggtgcgtgaatatggttttgacggatttcgttgcgactcggct
aggcatgtggaaccggaaacgtgggcgcagctcaagcacgcctgcgtgcaggcgaagcgg
gagtggtgggaacagcagcgcgatcgctccggcgcgacgccgcacttctggttgctcggc
gaagtctttggccatggcgtagagcggagcagctacttcgattgcggatttgacagcctg
ctcaatttctcatttcaggaggacattgagcgcggtatacatctggatgcgctgtacgag
gactacgcggcgcaattgcacgagcattccgatctaagcttcgtttcctacgtttcctcg
cacgatacgcatctgctcgatcggcgaaagatcagagaaggcagtgcagcattgatgctc
gctcccggtggcgtgctcctgttttacggtgatgaaacgggtcggttgccgggggctccg
aacgagcaggatcctgcccaagcggcgcgttcgccgatgaattggggcgcgactgatgcg
caattgctcatgcactggcgcaagctttcgcgctttcgaacaagacatcccgccgtcgcg
aatggtgttcaccttaagttgtttgattgcccttacgtgtttgcaagactcgacacgacg
ggggatagggtgttggtagcgatggcggtcgatggatatctgtcgctgccggtcggtgag
atgttcgccgatgggcaacaggtgcgcgacgcctatggtggctggcgcggtgtcgttaaa
gatggtcgggtgtcgctgaatgctgatggcttcgtgctactggaaaccgacgacggttcg
gcttggtacccagatatggattgtcggggaaggggtcttccatga
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