Ruminiclostridium herbifermentans: EHE19_009225
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Entry
EHE19_009225 CDS
T07161
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EHE19_009225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rher03021
]
EHE19_009225
03400 DNA repair and recombination proteins [BR:
rher03400
]
EHE19_009225
Enzymes [BR:
rher01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHE19_009225
Transcription machinery [BR:
rher03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EHE19_009225
DNA repair and recombination proteins [BR:
rher03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EHE19_009225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QNU68555
UniProt:
A0A4V6EP53
LinkDB
All DBs
Position
2217058..2217396
Genome browser
AA seq
112 aa
AA seq
DB search
MIYPSINDLMKTADSRYTLVVEAAKRARQLVDGAPKLSKVNSEKEVTIAINEIAEGKITY
VRTSKEKNLVDKFLSEETPIEETSLEKTSLEKISLEETPLDEVIFEESTIEE
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atgatttatccatcaataaatgatttgatgaagactgcagatagcagatatacattagta
gttgaagctgctaagagagcaagacagttagttgacggagcgcctaagctttcaaaagta
aattctgaaaaggaagttactattgctattaatgaaattgcagaaggaaaaataacttat
gttagaacaagtaaagagaaaaacttagttgataaatttctttcagaagaaactcctata
gaagaaacttctttagaaaaaacttctttagaaaaaatttctttagaagaaactccttta
gatgaagttatttttgaagaatcaaccatagaagaatag
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