Rhodoferax sediminis CHu59-6-5: EUB48_20405
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Entry
EUB48_20405 CDS
T06165
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00970
Aminoacyl-tRNA biosynthesis
rhf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EUB48_20405 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rhf03029
]
EUB48_20405 (gatB)
Enzymes [BR:
rhf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
EUB48_20405 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
EUB48_20405 (gatB)
Mitochondrial biogenesis [BR:
rhf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
EUB48_20405 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DUF1902
Motif
Other DBs
NCBI-ProteinID:
QDL39421
UniProt:
A0A515DG72
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All DBs
Position
4227918..4229408
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AA seq
496 aa
AA seq
DB search
MSEPVNTFEALQQGRPTGPLVRGYEVIIGFETHAQLSTHSKIFSRAATAFGAEPNTQACA
VDLALPGTLPVMNKGAVERAIQFGLAIGARIAPRSIFARKNYFYPDLPKGYQISQYEIPV
VQGGSVSFFLGEESKTVRLVRAHLEEDAGKSLHEDFVGMSGIDLNRAGTPLLEIVTEPDM
RSTAEAVAYARELHKIVTWIGICDGNMQEGSFRCDANVSVRKPGERLGTRREIKNLNSFK
FMQQAIDYEIRWQIEQLEDGHAIQQATVLFDPGTGETRAMRTKEDAADYRYFPDPDLPPL
AIASEWVERVRAQMTELPRVMAARFCADYGLSDYDATALTQSREMAAYFEATAKACNQPK
LASNWIMGEVSRRLNTDEIGIEQAPVPAARLAQLITRIADETISNSAARQVFDALWTAEG
SDVDGLIEAKGLKQMNDTSALDKIIDDVLAANTKSVEEFRAGKDKAFNALVGQVMKASKG
KANPSQVNDSLRKKLG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccgtgaacactttcgaggccttgcaacaaggccgccccactggtccgctg
gtacggggctacgaggtcatcatcggcttcgaaacccacgcgcagctgtccacacacagc
aagattttcagccgcgccgccacggccttcggcgccgagcccaacacccaggcctgcgcg
gtcgatctggcgctgccgggcaccctgccagtcatgaacaagggcgcggtggagcgcgca
atccagttcggcctggcgatcggcgcgcgcatcgcgccgcgcagcatctttgcacgcaag
aactacttctaccctgacctgcccaagggctaccagatcagccagtacgagatcccggtg
gtgcagggtggttcggtctcgtttttcctcggcgaggaatccaagaccgtgcgactggta
cgcgcccacctcgaagaggatgccggcaagtcgctgcacgaagacttcgtgggcatgagc
ggcatcgacctgaaccgcgccggcacgccgctgctggagatagtgaccgagcccgacatg
cgctccaccgccgaggccgtggcctacgcccgcgaactgcacaagatcgtgacctggatc
ggcatttgcgacggcaacatgcaggagggctcgttccgctgcgatgccaacgtgtcggtg
cgcaagcccggcgagaggctcggcacgcggcgcgaaatcaagaacctgaacagcttcaag
ttcatgcagcaggccatcgactacgagatccgctggcagatcgagcagcttgaagacggc
catgcgatccagcaggccaccgtgctgttcgaccccggcacgggcgagacccgcgccatg
cgcaccaaggaagacgcggcggactaccgctacttccccgacccggatctgccgccactg
gcgattgcgtccgaatgggtggagcgcgtgcgcgcgcagatgaccgagctgccacgcgtg
atggcggcgcgcttctgcgcggactatggcctttcggactacgacgcgacggcattgacg
caaagccgcgagatggcggcttatttcgaagccaccgccaaagcctgcaaccagcccaag
ctggccagcaactggatcatgggtgaagtctcgcgccgactgaataccgacgagatcggc
atcgaacaggcgcccgtcccggcggcccggctcgcgcagctgatcacgcgcattgccgac
gagacgatttccaacagcgccgcgcggcaggtgttcgatgcactgtggactgccgagggc
agcgacgtggacggcctgatcgaagccaagggcctgaagcaaatgaacgacaccagcgcc
ctcgacaagatcatcgacgacgtgctggccgccaataccaaatccgtcgaggagttccgc
gccggcaaggacaaggcgttcaacgcactggtcggccaggtcatgaaggccagcaaaggc
aaggcgaacccctcgcaggttaacgactcgctgcgaaaaaagctcggctag
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