Rhodoferax sediminis Gr-4: EXZ61_11505
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Entry
EXZ61_11505 CDS
T06176
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rhg
Rhodoferax sediminis Gr-4
Pathway
rhg00020
Citrate cycle (TCA cycle)
rhg00785
Lipoic acid metabolism
rhg01100
Metabolic pathways
rhg01110
Biosynthesis of secondary metabolites
rhg01120
Microbial metabolism in diverse environments
rhg01200
Carbon metabolism
rhg01210
2-Oxocarboxylic acid metabolism
Module
rhg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EXZ61_11505
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EXZ61_11505
Enzymes [BR:
rhg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
EXZ61_11505
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Ph1570
Motif
Other DBs
NCBI-ProteinID:
QDL54746
UniProt:
A0A515EQ25
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All DBs
Position
complement(2500766..2503657)
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AA seq
963 aa
AA seq
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MSETTPQAGSNASVYQAYQSNTYLFGGNAPYVEEMYENYLANPGSVPDSWRDYFDALQHV
PAVDGSTAKDVAHLPVINAFVDLAKKGVKQTVMATGADSEMGRKRTAVQQLIAAYRNVGA
RWADLDPLKRMERDKIPELEPSFYGFNDADQETVFNISNTFFGKESMSLRELMNALRETY
CGTIGVEYMYTTDQNQKRWWQQKLEATRSKPQFNAEKKKHILERLTAAEGLERYLHTKYV
GQKRFSLEGGESFIAAMDELIQQAGAKGIQEIVIGMAHRGRLNVLVNTLGKMPADLFAEF
DHTAPEELPAGDVKYHQGFSSDVSTAGGPVHLSLAFNPSHLEIVNPVVEGSVRARMDRRG
DPKGAQVLPVLVHGDAAFGGQGVNQETLALAQTRGYTTGGTVHIIINNQIGFTTSDPRDM
RSSAFCTDIVKMVESPVLHVNGDDPEAVVLATQLALEFRMEFGQDVVVDITCYRKLGHNE
QDTPSLTQPLMYKKISAHPGTRKLYADKLAAQGLGAELGDAMIKEYRAAMDAGKHTVDPV
LTNFKSKYAVDWSPFLGKKWTDAGDTAIPMTEWKRLSEKLTTIPESVTPHQLVKKVYDDR
AAMGRGEVNVDWGMGEHMAFASLVASGYPVRLSGEDCGRGTFTHRHAVIHDQKREKWDAG
TYVPLQNVADNQAPFVVIDSILSEEAVLGFEYGYASNDPNTLVIWEAQFGDFANGAQVVI
DQFIASGEVKWGRVNGITLMLPHGYEGQGPEHSSARLERFMQLAADTNMQIVQPTTASQI
FHVLRRQMVRNLRKPLIIMTPKSLLRNKDATSPLSEFTKGGFQTVIPESKELKGDKVKRV
IACSGKVYYDLVKKREEKGDADVAIIRVEQLYPFPHKAFATELKKYPNATDVVWCQDEPQ
NQGAWFFVQHYIHENMLDGQKLGYAGRAASASPAVGYAHLHQEQQKALVEAAFGKLKGFV
LTK
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacaacaccccaagcgggttccaacgcgtctgtctatcaggcgtaccaaagc
aatacctacctgtttggtggcaatgcaccgtatgtcgaagagatgtacgaaaactacctc
gccaaccctggcagcgtgccagattcatggcgcgactacttcgatgccttgcagcacgtg
cccgccgtagacggtagcactgccaaagacgtggcgcatttgcccgtcatcaacgcattt
gtggatctggccaaaaagggcgtcaagcaaaccgtcatggcaacgggcgcagactccgaa
atggggcgcaagcgcactgctgtgcagcagttgattgctgcctaccgtaatgtgggcgca
cgctgggcagatctggaccccctcaagcgcatggagcgcgacaagattcctgaattggag
ccatctttctacggcttcaatgatgcagaccaagaaacggtcttcaacatcagcaacacg
ttcttcggtaaagagtccatgagcctgcgtgagctcatgaacgctttgcgcgaaacctac
tgcggcaccatcggcgtggagtacatgtacaccaccgaccaaaaccaaaaacgctggtgg
cagcaaaagctggaggcgacccgtagcaagccccagttcaacgcagaaaagaaaaaacac
atcctagagcgcctgactgcggctgaaggcttggagcgctacttgcacaccaagtacgtg
ggccaaaagcgcttctccctcgaaggcggcgaaagctttatcgccgccatggacgagctg
atccagcaagccggtgccaaaggtatccaagaaatcgtgatcggtatggcccaccgtggc
cgcctgaacgtactggtgaacaccttgggcaagatgcctgcagacctgtttgctgagttt
gaccacaccgccccagaggagctgcctgctggtgacgtgaagtaccaccaaggctttagt
tccgatgtgtccacggctggtggccctgtgcatttgtcgctggcttttaacccgtctcac
ttggaaattgtgaatcccgtggtggaaggttcagtgcgcgcgcgtatggaccgccgcggc
gaccccaaaggcgcccaagtgttgcccgtgctggtgcacggtgatgcagcgtttggtggt
caaggcgtcaaccaagaaactctggccctggcccaaacccgtggttacaccacaggcggc
acggtgcacatcatcatcaataaccagatcggtttcaccacgtcggacccacgcgatatg
cgctctagcgcgttttgtaccgacatcgtgaagatggtggagtcgcccgtgttgcacgtg
aatggtgacgacccagaagcagtggtgctggccactcagttggccttggagttccgcatg
gaattcggccaagacgtggtggtagacattacctgctaccgcaaactgggtcacaacgag
caagacacaccgtcgctcacccagccattgatgtacaaaaaaatcagtgcgcaccccggc
acccgcaagctgtacgcggacaaattggcggcccaaggcttgggcgccgagctaggtgat
gccatgatcaaggaataccgtgccgcgatggatgctggtaagcacaccgtggatcccgta
ctgacaaacttcaagagtaagtacgcagtggactggtctcccttcttgggcaagaagtgg
actgacgctggcgacaccgctatccccatgaccgaatggaaacgtttgtctgaaaagctt
acgactattccagaaagcgtcaccccccaccaattggtgaaaaaggtctacgacgaccgc
gcagccatgggccgtggtgaggtcaatgtggattggggcatgggcgagcacatggccttc
gcctctttggtggccagcggctaccccgtgcgtttgtcgggtgaagattgtggacgcggt
acctttacccaccgccacgccgtcattcacgaccaaaagcgtgaaaagtgggatgcaggc
acctacgtgcctttgcaaaacgtggccgataaccaggccccgtttgtcgtgatcgactcc
atcctgtccgaagaggcagtgttgggctttgagtacggttatgcatccaacgacccgaac
actctggtgatctgggaagcccagttcggcgatttcgccaatggcgcccaagtggtgatc
gaccagtttattgcgtccggcgaagtgaagtggggccgtgtgaacggcatcaccttgatg
ttgccccacggctatgaaggccaaggccccgagcacagctcggcgcgcctggagcgattc
atgcaattggccgctgacaccaacatgcagatcgtgcagcccaccacggccagccagatt
ttccacgtgctgcgtcgtcagatggtgcgtaacttgcgcaagcctttgatcatcatgacg
cctaagagcttgttgcgtaacaaagacgcgacttcgcctttgtctgagttcaccaaagga
ggcttccaaaccgtcattcctgagagcaaagaactcaagggtgacaaggtcaagcgcgtc
attgcctgctccggcaaggtgtactacgacttggtcaagaagcgcgaggaaaaaggggat
gcggatgtggccatcatccgtgtggaacagctgtaccccttcccgcacaaagcctttgcc
actgagctcaaaaagtacccgaatgccaccgacgtggtgtggtgccaagatgagccacaa
aaccaaggcgcgtggttcttcgtgcagcactacatccacgaaaacatgctcgatggccaa
aagctgggctacgccggacgcgctgcgtctgcctcccccgcggtgggttatgcccacttg
caccaagagcagcaaaaagctttggtcgaagccgcatttggcaagttgaagggctttgtt
ctgaccaaataa
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