Sinorhizobium fredii NGR234: NGR_c23440
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Entry
NGR_c23440 CDS
T00888
Symbol
rpoE
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhi03021
]
NGR_c23440 (rpoE)
Transcription machinery [BR:
rhi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NGR_c23440 (rpoE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ACP26103
UniProt:
C3MFP6
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Position
2435404..2435922
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AA seq
172 aa
AA seq
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MRPAAEMKDFRRDLVSLLPKLRRFAMTLTRNANDADDLVQEVCERAISRSHLWNGEGRLE
SWIYTMTRNLWVDEVRKRKVRGTGSMVDIFDQDDLNVEATAEKAVYANQLQKMILSMPEG
LASVFLLVNVEGHSYRETATILGIPIGTVMSRLSTARLRLAAMLSEDTERRA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccagcggcagagatgaaggacttcagacgggatttggtcagcctgctgcccaaa
ttgcgccgcttcgcgatgacgctgacgcgcaatgccaacgatgccgacgacctcgtccag
gaagtttgcgagcgggcgatcagccgcagccacctgtggaacggcgaggggcggctggag
agctggatctatacgatgacccgcaatctctgggtggacgaagtccgcaagcgcaaggtt
cgcggcaccggcagcatggtggacatattcgatcaggacgatttgaatgtcgaagccacg
gccgagaaggcagtttatgccaaccagttgcagaagatgatcctttccatgccggaagga
ctggcaagcgtcttcctgttggtcaacgtcgaaggtcacagctaccgggaaaccgcgacg
atcctcggcatcccgatcggcacggtgatgagcaggctctcgacagcgcgcctgcggctc
gcggcgatgttgtccgaggatacggaaaggagggcctga
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