Rhizobium hidalgonense: FFM81_028125
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Entry
FFM81_028125 CDS
T07043
Name
(GenBank) DUF4082 domain-containing protein
Organism
rhid
Rhizobium hidalgonense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4082
DMFA2_C
Cadherin_5
Big_9
Cadherin_4
CshA_repeat
Cadherin_3
Big_7
Mo-co_dimer
Motif
Other DBs
NCBI-ProteinID:
QKK27111
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All DBs
Position
pPR19E01:complement(1451287..1456641)
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AA seq
1784 aa
AA seq
DB search
MRKGTPLMRRIRVSNREYLSTFGGALSICRAPSAWSAVLGTATVVSSTSTDGSLSFANNG
GFANPDGAAVPSSFTGPSSFTGNIMQPAALFSSSGVETASIPPTAMPAPAGEGGARDPST
KTASVATVLQTTTTTSSERTVLGPDPYQEAATLPAAPVLTGVTSDAGTAGSTTPSADPAA
GSGTTSLRLQTSIASISLEPSQDGSAGSTGSTATPAALAAPVAAAAVTPNKIALENMKQG
NPISEWGLEGDGKGTIQGFATEISTNIGQTVDFKIATDSTHYRIDIYRMGYYGGDGARKV
DSIEQSLTTAQIQPHPIVDMSLGLIDCGNWSVSASWQIPTDAVSGVYFAKLVREDGTEDA
SIIPFVVRDDASHSNIVFQTSDTTWQAYNAWGGASLYYGEVPVDPAAMIGYLPPNCSCGL
QAIGRASAVSYNRPIITNTSPVGGSHDYIFGVESSAISWLEQNGYDVSYISGVDAARSGA
LLLNHDAYLSVGHDEYWSAEQRSNVEAARDAGVNLAFWSGNECYWKVRWESSIDGSGQAY
RTMVCYKETWGTSTDPSNVGTGTWRDPRYADPGQQPENALTGTMFQVDSYRQDTISIPYD
YSNLRFWRNTDVSQLNEGDTYNLVQNLLGYEWDSDVENGFRPAGLVNLSLSSVSVDTYLR
DYGATIGSAVATHSLTMYRAASGALVFGAGTVFWSWGLSDNHQGPTTSTDRNVQQAMVNM
FADMGIQPTTLDASLILATQSTDTLKPTSSISSPVVGASFLEGQHVTISGTAQDFGGGII
AGVEVSTDGGQHWFKASGRESWSYNWVVQASGAYTIMSRAVDDSVNMETPSAGKQVTVSL
PGTTGLWTLAEKPATEVAIDRDSVELGLRFQTTTAGSVEGIRFYKGFYNIGDHAVSLWSA
NGTLLATGVSVGESLSGWQTVMFSSPIQIAAGTTYVASYHSSGFYSATNNYFGGTYASGA
LKAVDGGGVFAYGTTAGTFPGQSPGTGTNYWVDVVFDAGPNGAPVATDDTGFVISSNDTV
SISIASLVGNDTDPNGDALTISAVGNAVNGTVTLNKQNGTVVFTPTNDYSGPASFTYTLS
DGRGGTDQGGVSLTVNPGPAGATLFTSSEGPTGASFNDGQSMELGMKFVASASGMITGIR
YYKAAGDTGAHTGSLWTAGGTLVATVTFADSGSVNGWQTATFANPVHIAAGTTYVASYST
TGSYVATADYFTSAHSNGSLTALAGSNGVYTVGGSAFPTSSYQSSNYWVDVVYNQATGNA
VPVAANDNGYTTYSDTALSIAAASLLANDTDADGDALSITGVNGAVHGTVTYNGQTKTVT
FTPAAGYTGAASFSYSISDGLGGTASATVSLTVGAPGGGTTSSLFTGADTSGVAAANDAN
SVELGVKFIASATGQITGLTYYKSAQDTGTHVGSLWTTSGQLLAQATFINEMASGWQTVS
FTQPINVTAGATYVASYHSNGFYSATSNYFTTDHTSGGLTAPSSASSGGNGLYAYGSGSL
FPTASYNATNYWVDVLYQQGGAQNAVPVAANDSGFSTNTGTPITIQASVLLANDTDTDGD
PLVVTGVSGAVNGSVAWNAQAQTVTFTPTAGYSGPASFSYAIADGKGGTASAQVALTING
GQTGPEQNLFSANATPSTVSVNDNQQVNLGMKFQADTSGWVTGIRFYKGADNTGPHNGYL
WTASGTLIGSVTFNNETASGWQTAQLTQQIAIEADTTYVVSYSSNGNYSATGNYFASDVT
NGDLKALGGSNGVYAYGAGGLFPTASYNSTNYYVDVAFKPQLAA
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaggggacgccgctgatgcggagaattcgcgttagtaaccgtgagtacctgagt
acatttggtggagcgttaagtatctgtcgtgcaccctcagcctggagcgcagtgctggga
accgcgacggttgtatcttccacaagtaccgatggttccctaagctttgccaataacggc
ggcttcgccaatcccgacggggccgccgtcccgtcctccttcacaggtccgtcttccttt
accggcaatatcatgcagcctgccgcgctgttctcatcaagcggcgtggagactgcctcg
ataccaccgacggcgatgcccgcgcctgcgggcgagggcggcgcgcgggacccgtccacc
aagacggcgtcggttgcgacggtgttgcagacgacgacgaccacatcatccgagcgcact
gtgcttggtccggacccatatcaggaggctgcgacactgcctgccgctcccgtgctgacg
ggtgttaccagcgatgccggcacggcaggctctaccacgccgtcggccgatcctgccgcc
ggttccggcacgacgtcattgcgccttcagacctcgatagcctccatctcgctggagccg
agccaagacggttccgctggttccaccggttcgaccgcgacgcctgcggcgcttgcagca
ccggtggcggcggcggcggtgacgcccaacaagatcgcgctcgaaaacatgaagcagggc
aaccccatcagcgaatggggcctggagggcgatggcaaaggcaccatccagggctttgcc
accgaaatcagcacgaatatcgggcagacggtcgatttcaagatcgccaccgattccacc
cattaccgcatcgatatctaccgcatgggctattatggtggggacggcgcgcgcaaggtc
gactcgatcgaacaatctctgaccacggcgcagatacagccgcatccgatcgtcgacatg
tcgctcggtctcatcgattgcggcaactggtcggtttcggcgagctggcagattccgacg
gacgccgtctccggcgtctatttcgccaagctggtgcgtgaggatggcaccgaggatgca
agcatcatccccttcgtcgtgcgcgacgacgcctcgcacagcaatatcgtcttccagacc
tcggatacgacatggcaggcctacaatgcctggggcggcgccagcctctattacggcgaa
gtgcctgtcgatccggccgccatgatcggctacctgcccccgaactgcagctgcggcctg
caggcgatcggccgcgcctcggcggtcagctacaacagaccgatcatcaccaatacgagc
ccggtcggcggctcgcatgattatatcttcggcgtcgaatcctccgcgatctcgtggctg
gagcagaacggctacgacgtgtcctatatttccggcgtcgatgcggcgcgcagcggcgcg
ctgctgctcaaccatgatgcctatctctcggtcggccacgacgaatactggtcggccgag
cagcgcagcaatgtggaggccgcgcgtgatgccggcgtcaatctcgctttctggagcggc
aacgagtgctactggaaggtgcgctgggaaagcagcattgacggcagcggccaggcctac
cgcaccatggtctgctacaaggagacctggggcacgagcaccgatccgagcaatgtcggc
accggcacctggcgcgatccgcgttatgccgatccggggcaacagccggagaatgcgctg
acgggaacgatgttccaggtcgacagctaccgtcaggacacgatctccatcccctacgac
tattccaacctgcgcttctggcgcaataccgatgtttcccagctgaatgaaggcgacacc
tacaatctggtgcagaacctgctcggctacgaatgggattccgacgttgagaacggcttc
cgtccggccgggctcgtcaatctgtcgctctcgtcggtctcggtcgacacctatctgcgc
gattacggcgcgaccatcggttcggcagtcgccacccacagcctcaccatgtaccgtgcg
gcaagcggcgcgctggtcttcggcgccggcaccgtcttctggtcctggggtctgagcgac
aatcaccaaggcccgacaacgtcgaccgatcgcaacgtccagcaggcgatggtcaacatg
ttcgcggacatgggcatccagccgacgacgctcgatgcaagcctgatcctcgcgacccaa
tcgaccgacaccctgaagccgacctcgtccatctcgtcgccggtcgtcggcgcaagcttc
ctcgaaggacagcatgtgacgatatcaggcacggcgcaggatttcggcggcggcatcatt
gccggcgtggaagtttcgaccgatggcggccagcactggttcaaggcgtcaggccgcgag
agctggagctataactgggtcgtccaggcgagcggagcctacacgatcatgtcgcgggcc
gtcgacgacagcgtcaatatggagacgccatcggcgggcaagcaggtcacggtcagccta
ccgggaacgacgggcctctggacgcttgcggaaaagccggcaaccgaagtggcgatcgat
cgcgattccgtcgagctcggcctgcgcttccagacgacgacggcaggctccgtggagggc
atccgtttctacaagggcttctacaatatcggcgaccatgccgtgagcctctggagtgcc
aacggaacgttgctggcaacaggcgtgtccgtcggtgaatcgctctccggttggcagacg
gtgatgttctccagcccgatccagattgccgccggcacaacctatgtggcctcctatcac
agcagcggtttctattccgccaccaataattatttcggcggcacctatgccagcggcgcg
ctgaaggctgtcgacggcggcggcgtcttcgcctacggcaccactgccggcacgtttccc
ggccaaagccccggcaccggcacaaattactgggtcgacgtggtcttcgatgccggtccc
aatggcgcgccggtcgcgaccgacgatacggggttcgtcatctccagcaacgatacagtt
agcatctcgatcgcctcacttgtcggaaacgatacagatcccaatggcgatgcgctgacg
atttcggccgtcggcaatgccgtcaatggcacggtgacgctcaacaagcagaacggcacc
gtcgtcttcacgccgaccaacgattattcggggccggcaagcttcacctatacgctgtcg
gacgggcgcggcggcacggatcagggcggcgtcagcctcaccgtgaacccaggccctgcc
ggagcgacactgtttacatcaagcgaaggaccgacgggcgcaagcttcaacgacggccag
tcgatggaactcggcatgaagttcgtcgcttcggcgagcggcatgattaccggcatccgc
tactacaaggcagcaggcgataccggagcccataccggctcgctctggacggccggcggc
acgctggtcgcgaccgtcaccttcgccgacagcggatcggtgaacggctggcagaccgcg
acattcgccaacccggtgcatatcgcggccggcacgacctatgtcgcctcctacagcacg
acaggctcctatgtcgcgacggcagactatttcacatcagcccatagcaatggctcgctg
acggcgctcgccggcagcaatggcgtctacacggtcgggggctcggcgttcccgacctcc
agctaccagtcgtcgaactactgggtggatgtcgtctacaatcaggcgacgggcaacgcg
gtgccggtcgccgccaatgacaatggctacacgacttattccgacacggcgctgtcgatt
gccgcagccagtctgcttgcaaacgacaccgatgccgatggcgacgcgctcagtatcacc
ggcgtcaatggcgcggtccacggaacggtgacttacaacggccagaccaagactgtgact
ttcaccccggcggcgggttatacgggtgcggcaagcttctcttattcgatctcggacgga
ttgggcggcacggcgtcggccacggtcagcctcaccgtcggcgcgcccggcggaggaacg
acatcaagcctgttcaccggcgccgacacgtctggggttgccgccgccaatgacgccaac
tcggtcgaactcggcgtcaaattcatcgcgtccgcaaccggccagatcaccgggctcacc
tattacaaaagcgcccaggataccggcacgcatgtcggctcgctgtggacgacgagcggc
cagcttctggcccaggcgacctttatcaacgagatggcgagcggctggcagacggtttcc
ttcacccagccgatcaatgttacggccggcgccacctatgtggcgagctaccattcgaac
ggtttctattccgcaacgtcgaattacttcacaacggaccatacgagcggcgggctgacg
gcgccatcgagtgcttcgagcggcggcaacggtctttatgcctatggctccggcagcctg
ttcccgaccgcttcctacaatgcgaccaattactgggtcgacgttctctaccagcagggc
ggcgcacagaatgcggtgccggtcgccgccaatgacagcggcttctcgaccaataccggc
acgccgatcaccatccaggcatcagtgctcctggcaaatgacaccgacaccgatggcgac
ccgcttgtcgtcaccggcgtcagcggcgcggtcaacggctcggtcgcctggaatgcgcag
gcccagacggtgacattcacgccgacggcaggttattcggggccggcgagcttcagctac
gcgattgcagacggcaagggcggcacggcgtcggcgcaggtcgcgctcaccatcaacggc
ggccagacggggccggagcagaacctcttttccgccaatgcgacgccttcaaccgtctcc
gtcaacgacaaccagcaagtcaatctcggcatgaaattccaagccgatacgtcaggctgg
gtcaccggcatccgcttctacaagggcgccgacaataccggcccgcataacggctatctc
tggaccgcctctggcacgctcatcggcagtgtcaccttcaacaacgagacggcgagcggc
tggcagactgcgcagcttacccagcagatcgccatcgaggcggatacgacctacgtcgtt
tcttattcgagcaacggcaattattcggccaccggcaattattttgccagcgacgtgacg
aacggcgatctcaaggcgctcggcggcagcaacggcgtctatgcctacggggcgggcggg
ttgttcccgacggccagctacaacagcaccaactactatgtggacgtggcgttcaaacca
cagctcgcggcgtaa
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