Rhizobium sp. Kim5: Kim5_CH03563
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Entry
Kim5_CH03563 CDS
T05501
Name
(GenBank) PAS/GAF/phytochrome domain-containing protein
Organism
rhk
Rhizobium sp. Kim5
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Gene cluster
GFIT
Motif
Pfam:
PHY
HWE_HK
PAS_2
GAF
Response_reg
HisKA_2
cREC_REC
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ARQ59585
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Position
3572735..3575305
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AA seq
856 aa
AA seq
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MSGTREPVDLTNCDREPIHQLGAIQPFGFLLAVSSDWIVTRASVNLADFLGVTQADALGR
PASTLIMPEALHAIRNKLTTLRGADVVERIFAIALTPDQSKFDVAVHFNEDQVIIEGERC
QEDRRNAPSLSMRSMMSRLDQSETLDAFFREGARQARALTGFDRVMVYRFDEGGSGEVVA
EAARSGIGSFLGLHYPASDIPVQARALYLRNLFRIIADVDAVPVPVLPERDERGQPLDLS
MSVLRSVSPIHIEYLKNMGVGASLSISIVVDGKLWGLFACHHYGPRLPSAQSRSTAELFG
QMFASRLESRERRLALDYETKARRIADRLLTSVADNASLLDDPAWLIEAVADAIPADGIG
VWINGRLALAGIGPDEKNFAALVRHLNRNAAGRIYAVDRLAETYPELGIDGAVAGMLAIP
ISRSPRDYVVLFRQELVRTVRWGGDPHKPVEYGPNGPRLTPRKSFEAWSELVRGRSLPFT
EAERRVAETIRATLIEVVLRLTDEASMARQMANERQELLIAELNHRVRNILSLITGIIRQ
SQTTSVSLSDYIRQIEGRVQSLARAHDQITRDHWAPASLRQLLLAETAAYLGKYAQRIQM
RGEDVLLEPQAFSTAALVFHELMTNSAKYGSLSGTGSGIVELGWSRDDEGNLRIGWREKD
GPPVTEPTHHGFGSTIIRRSIPYDLGGKAEVRYNRNGLEADFFIPGRYVVRPTSERSDST
PFGAAAPKLIAGGRQPLSGLSVLLVENNLIIAMDGEDILRRLGAEVATVPSVAEAMKILD
HRSFDLALLDVDLGDETSFGIADRLAAGGVPFIFATGYGEGIAQANSHSDAPVLQKPYTM
EAVTDSLARLPLPKRK
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacgcgaacccgtcgacctcaccaattgcgaccgcgagccgatccatcag
ctcggcgcaatccagcccttcggctttctgctggcagtatcttcggattggatcgtcaca
cgcgcctccgtaaaccttgcagactttctgggcgtgacacaggccgatgctctcggccgt
cccgcttccacgctgatcatgcccgaagcgctccatgcgatccgcaataagctcaccacc
ttgcgcggtgccgatgtcgtcgagcgcattttcgcgatcgccctgacgcccgatcaatcc
aagtttgacgttgccgtgcacttcaatgaagatcaggtcatcatcgaaggcgagcgctgc
caggaagataggcgcaacgccccatccctctccatgcgcagcatgatgtcccgcctcgac
cagtcggaaacgctggatgccttcttccgcgagggggcaagacaggcgcgcgccctgacc
ggcttcgaccgggtcatggtctatcgtttcgacgaaggcggttccggcgaggttgtagcc
gaagccgcccgcagcggcatcggctcgttcctgggactgcattatcccgcttccgacatc
ccggtgcaggcgcgagcgctttacctgcgcaacctgttccgcatcattgccgatgtcgat
gccgttccggtcccggtccttccggaacgcgacgaacgcggccagccgctcgatctctcc
atgtcggtgctgcgctcggtttcgccgatccacatcgaatatctgaagaatatgggcgtc
ggcgcttcgctctccatatcgatcgtggtggatggcaagctctggggcctctttgcctgc
caccattacggcccgcgcctgccgtcggctcaaagccgctccaccgccgaactcttcggt
cagatgttcgcgtcgcgtctggaaagccgggaacggcggttggcgctcgactatgagacc
aaggcgcgtcgcatcgccgaccggcttctcacctccgtcgccgacaatgccagtctgctc
gacgacccggcctggctgatcgaggcagtcgccgacgccattcctgccgacgggatcggt
gtgtggatcaacggccggctggcgcttgccggcatcgggccggatgagaaaaattttgcg
gccctcgtccgccatctcaatcgcaacgccgccggccgcatctatgccgtcgacaggctt
gccgaaacctatccggagctcgggatcgacggtgcggtggcgggcatgctggcgatcccg
atctcgcgctcgccgcgcgattatgtcgtgctcttccgccaggagctggtgcggaccgtc
cgttggggcggcgacccgcacaagccggtggaatatggacccaacggcccgaggctgacg
ccgcgcaagagtttcgaggcctggtcggaactggtgcgcggccgctcacttccgttcacg
gaagcggagcgccgcgtcgccgaaacgatccgcgccacgctgatcgaggtggttttgcgc
ctgacggacgaggccagcatggcgcgccagatggcaaatgagcgacaagagctgctgatc
gccgaactcaaccaccgcgtccgcaacatactgagcctgatcaccggcatcatccgccag
tcgcagacaacgtccgtgagcctcagcgactacatccgccagatcgagggccgcgtccag
tcactcgcccgtgctcatgaccagattacccgcgatcactgggcgcctgcttcgcttcgg
caattgctgctggccgagaccgccgcctatcttggcaaatatgcgcaacgcattcagatg
cgcggcgaggacgtgctgctggagccgcaggccttttccaccgctgcccttgttttccac
gagctgatgaccaacagcgccaaatatggcagcctttccggcactggcagcggcatcgtc
gaactcggctggtcccgcgatgacgaaggcaatctgcgcattggctggcgcgaaaaggat
ggcccgcccgtcaccgaacccacgcatcacggcttcggctcgacgatcattcggcgctca
attccctatgacctcggcggcaaggccgaagtgcgctacaacaggaacgggctcgaagcg
gatttcttcattccggggcggtatgttgtccgcccgacgagtgagcgatcagattcaacg
ccgttcggcgcagctgcacccaagctgattgcaggcggtcgacagccgctttccggcctg
agcgtgctgctggtggaaaacaacctgatcattgccatggacggcgaagatatattgcgc
cggctgggcgccgaagtagcaaccgtaccaagcgttgccgaggccatgaaaatcctggac
caccggtccttcgacctggcgcttctcgatgtcgatctcggtgatgagaccagcttcggg
attgccgaccgactggcagccggaggtgtgcccttcatttttgccacaggctatggggag
ggcatcgcccaggcgaacagccattcggatgcgcccgtcttacaaaagccctatacgatg
gaagctgtgacggacagtctcgcccgtctgccgcttcctaaacgtaagtag
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