Rhizobium sp. Kim5: Kim5_CH04248
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Entry
Kim5_CH04248 CDS
T05501
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00020
Citrate cycle (TCA cycle)
rhk00785
Lipoic acid metabolism
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01120
Microbial metabolism in diverse environments
rhk01200
Carbon metabolism
rhk01210
2-Oxocarboxylic acid metabolism
Module
rhk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Kim5_CH04248 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Kim5_CH04248 (sucA)
Enzymes [BR:
rhk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Kim5_CH04248 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ARQ60239
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All DBs
Position
complement(4296191..4299175)
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AA seq
994 aa
AA seq
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MARQEANEQFQITSFLDGANAAYIEQLYARYEEDPASVDDQWRAFFKALEEDPADVKKAA
KGASWRKKHWPLAAGGDLVSALDGNWGIVEKAIETKVKAKAEAAGKPADTTDVLQATRDS
VRAIMMIRAYRMRGHLHAKLDPLGIAATVDDYHELSPENYGFTSADYDRKIFIDNVLGLE
YATIREMIEILERTYCSTLGVEFMHISNPEEKAWIQERIEGPDKGVAFSAEGKKAILAKL
IEAEGYEQFLDVKFKGTKRFGLDGGESLIPALEQILKRGGHLGLKEAVFGMAHRGRLNVL
SQVMGKPHRAIFHEFKGGSYAPDEVEGSGDVKYHLGASSDREFDGNKVHVSLTANPSHLE
IVDPVVMGKVRAKQDMSATVWDGDIIPLSERAKVLPLLIHGDAAFAGQGVIAEILGLSGL
RGHRVAGTMHVIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPILHVNGDDPEAVVYAAKI
ATEFRMKFHKPVVVDMFCYRRYGHNEGDEPSFTQPKMYKVIRGHKTVLQLYADRLVREGL
LTDGEVEKMKADWRAHLEQEFEAGQSYKPNKADWLDGEWSGLRTADNADEQRRGKTAVPM
KTLKEIGRKLSEIPAGFNAHRTIQRFMENRANMIATGEGIDWAMAEALSFGALCLEGHKI
RLSGQDCERGTFSQRHSVLYDQETEERYIPLANLSPTQARYEVINSMLSEEAVLGFEYGY
SLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHSS
ARLERFLQLCAEDNMQVANVTTPANYFHILRRQLKRDFRKPLILMTPKSLLRHKRAVSTL
AEMAGESAFHRLLWDDAEVIKDGPIKLQKDNKIRRVVMCSGKVYYDLLEEREKRGIDDIY
LLRVEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPFLEWVLAHIDAKYQR
VRYTGRPAAASPATGLMSKHLSQLAAFLEDALGG
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcaagaagccaacgagcagtttcagatcacctcgtttctggatggcgccaac
gcggcctatatcgagcagctctatgcgcgctacgaagaggatccggcatcggtcgacgat
caatggcgcgccttcttcaaggcgctggaagaggatcctgctgatgtgaagaaggcggcc
aagggagcctcctggcgcaagaagcactggccgctggccgccggcggcgatttggtgtcg
gcgctcgacggcaattggggcatcgtcgagaaggcgatcgaaaccaaggtgaaggcaaag
gccgaagccgccggcaagccggccgacaccaccgacgtgctgcaggcgacgcgcgattcg
gtgcgcgccatcatgatgatccgcgcctatcgcatgcgcggccatctgcacgccaagctc
gatccactcggcatcgccgctaccgtcgacgactatcatgagctgtcgccggaaaattac
ggcttcacatcagccgattatgatcgcaagatcttcatcgacaacgtgctcggcctggaa
tacgcgaccatccgcgagatgatcgagatcctcgagcgcacctactgctcgacgctcggc
gtcgaattcatgcatatctccaatccggaggagaaggcctggatccaggagcggatcgaa
gggccagacaagggcgtcgccttctcggcggaaggcaagaaggcgatccttgccaagctc
atcgaagccgagggctacgagcagttcctcgacgtcaagttcaagggcaccaagcgtttc
ggtctcgacggcggtgaatcgctgatccccgcactggaacagatcctgaagcgcggcggc
catctcggccttaaggaagcggtattcggcatggcccatcgcggccgtctgaacgtgctc
tcccaggtgatgggcaagccgcaccgcgccatcttccacgagttcaagggcggttcctat
gcgcctgacgaagtcgaaggttccggcgacgtgaagtaccatctgggcgcttcctccgac
cgcgaattcgacggcaacaaggtgcacgtctcactgacggcaaatccgtcgcatctcgaa
atcgtcgatcctgtcgtcatgggcaaggttcgcgccaagcaggacatgagcgctacggta
tgggacggcgacatcattccgctgtctgaacgcgccaaggtgctgccgttgctgatccac
ggcgacgcggccttcgccggccagggcgtcattgccgaaattctcggcctctccggtctg
cgcggccaccgtgtcgccggcaccatgcacgtcatcatcaacaaccagatcggcttcacc
acgaacccggccttttcgcgctcgtcgccctatccgtctgatgtcgccaagatgatcgag
gcgccgatcctgcacgtcaacggcgacgatccggaagccgtggtctacgccgccaagatt
gcgaccgaattccgcatgaagttccacaagccggttgtggtcgacatgttctgctatcgc
cgctacggtcataacgagggcgatgagccgtccttcacccagccgaagatgtacaaggtc
atccgcggccacaagacggtgctgcagctttatgcagatcgtctcgttcgcgaaggcctg
ctcacggatggcgaagtcgaaaagatgaaggccgactggcgcgcacatctcgagcaggag
ttcgaggccggtcagagctacaagccgaacaaggccgactggctggacggcgagtggtcg
ggcctgcgcaccgccgataatgccgacgagcagcgccgcggtaagaccgccgtgccgatg
aagacgctgaaggagatcggccgcaagctctcggagatcccggcaggcttcaatgcgcac
cgcacgattcagcgcttcatggaaaaccgggccaacatgatcgccaccggcgagggcatc
gattgggcgatggcagaagcgctctccttcggggccctctgcctggaaggccacaagatc
cgcctgtccggccaggattgcgagcgcggcaccttctcgcagcgccactcggttctctac
gatcaggagaccgaagagcgttacattccgctcgccaatctttcgccgacgcaggcacgc
tacgaagtcatcaactcgatgctttcggaagaggccgtgctcggcttcgaatacggctat
tcgctcgcccgcccgaatgcgttgacgctctgggaagcgcagttcggcgatttcgccaac
ggcgcgcaggtggtcttcgaccagttcatctcctcgggcgaacgcaagtggctgcgcatg
tcgggcctcgtctgcctgttgccgcacggttatgaaggacagggtccggagcattcctcg
gctcgcctcgagcgcttcctgcagctctgcgcggaagacaatatgcaggtcgccaatgtc
acgacgccggcgaactacttccacatcctgcgccggcagctgaagcgtgacttccgcaag
ccgctgatcctgatgacgccgaaatcgctgctgcgccacaagcgggcggtctcgacgctg
gccgaaatggccggtgaatccgccttccatcgcctgctctgggacgatgccgaggtgatc
aaagacggcccgatcaagctgcagaaggacaacaagatccgccgcgtcgtcatgtgctcc
ggcaaggtctattacgatcttctcgaagagcgtgaaaagcgcggtatcgacgacatttac
ctgctgcgcgtcgaacagctttatccgttcccggcaaaggcgctcatcaacgagctgtcg
cgcttccgaaacgccgaaatggtctggtgccaggaagagccgaaaaacatgggcgcatgg
tcgttcatcgatccattcctcgaatgggtgcttgcccatatcgatgcgaaataccagcgc
gtccgttacaccggccgtccggctgccgcctcgccggcgacgggcctgatgtcgaagcat
ctgtcacagctcgccgcattcctcgaggatgcattgggcggttaa
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