Rhizobium favelukesii: LPU83_pLPU83d1379
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Entry
LPU83_pLPU83d1379 CDS
T03046
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
Organism
rhl
Rhizobium favelukesii
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_30
HTH_28
HTH_23
HTH_17
GerE
HTH_Tnp_ISL3
Motif
LinkDB
All DBs
Position
pLPU83d:1390423..1391115
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AA seq
230 aa
AA seq
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MSHIRTDRAEALDTLADVELARRAVARDRHAFRAIMKAHNQRLYRLARSIIRNDSEAEDV
VQEAYVLGFAHLNRFRGDASLATWLSRIVINEALGRLRKKRRSAGVANATNQLGGATIVQ
FPVDNTGDPERTMAQRQILQLVEQATDALPDIYRTVFVARVIEGLSVEETAALLGIRAQT
VKTRLHRARRLVRERLDQQIGPVLLSAFPFAGRRCERLTSAVMSRLGFPD
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacattcgaaccgatcgggccgaagcactcgatacgctcgccgatgtcgagctg
gcacggcgcgcggtcgcccgcgatcgccatgcgtttcgcgcaatcatgaaggcccacaat
cagaggctctatcgcctcgcaagaagcatcattcgcaacgacagcgaagcggaggacgtt
gttcaggaagcttatgtgctgggatttgcccatcttaatcgcttccgcggagacgcgtcg
cttgcgacctggctatcgcgcatcgtgatcaacgaagccctcgggcgtctgcgcaaaaag
cggcggagcgcgggcgtggcgaatgccaccaaccagctcggtggagcgacgatcgtccaa
ttccctgtcgacaacaccggcgatccggagcggaccatggcgcaacggcaaatcttgcaa
ctggtcgagcaggcaacagatgctctgcccgatatctaccgaacggtctttgtcgccagg
gtcatcgaggggttgagtgtcgaggagacggcggcgctacttggcatacgggcgcaaacc
gtcaagacccgattgcatcgcgccaggcgtctggtgcgcgagcgcctcgaccagcagatc
ggtcccgtgctcctttccgcatttccctttgccggccgccgttgcgagcgcctgacgagc
gcggtgatgagccgtctcggttttcccgattaa
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