Rhizobium sp. N1341: AMJ98_CH00288
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Entry
AMJ98_CH00288 CDS
T04420
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AMJ98_CH00288 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhn03400
]
AMJ98_CH00288 (xseA)
Enzymes [BR:
rhn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AMJ98_CH00288 (xseA)
DNA repair and recombination proteins [BR:
rhn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AMJ98_CH00288 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
Se-cys_synth_N
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ANL08017
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Position
292516..294096
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AA seq
526 aa
AA seq
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MSNLFDSDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKD
DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIEMLEPAGAGALMAL
IEERKRRLGAEGLFDAARKKRLPFMPHVIGVVTSPTGAVIRDILHRISDRFPVNVLVWPV
KVQGEGSGEEVANAIRGFNALEPAGAIPRPDVLIVARGGGSLEDLWSFNDEIVVRAAAES
RIPLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQ
MDQRRQSVRSLMRALPSLDQLLALPRRRFDEAAASLGRGLELNTINKRRGFERVATHLRP
DLLSGRLAERRQMLNERMVRAERMVERLIDRSTSRVERAEAILASLPARLKAQTGRSRER
LGNLSRHADTAIRHQLTRARAELSAQDRVLQSLSYKNVLKRGYAVIRDEDNRPVSQAAAL
SAGMGIAIEFADGRIGAMTTEGGTPPGGTKKRSTKPAEPTKQGSLF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctcttcgacagcgattcgccgaccaaccttgccgaatattcggtttcggag
ctttccggctcgatcaagcgcaccgtcgaaaccgctttcgaccaggttcgcgtgcgcggc
gaaatatccggttatcgcggtccgcactcctccggccacgcttatttcgcgctgaaggac
gatcgcgcccgtatcgacgccgttatctggaagggcactttctcgcggctgaagttccgc
cccgaggaaggcatggaggtgatcgccaccggcaaggtcaccacctttcccggctcctcg
aaatatcagatcgtcatcgagatgctggagccggcaggggccggcgcgctgatggcgctg
atcgaggagcgtaaacgcaggctcggcgccgagggcttgttcgatgccgctcgcaagaag
cggctgcccttcatgccgcatgtgatcggcgtcgtcacctcgccgaccggcgccgtcatc
cgcgacatccttcaccgcatctccgaccggtttcccgtgaatgttctcgtctggccggtg
aaggtccagggggagggatccggcgaggaggtggcgaacgctattcgcggcttcaatgcg
ctggagcccgccggcgccatcccccgcccggatgtgctgattgtcgcgcgcggcggcggc
agcctggaagatctctggagtttcaacgacgaaatcgtcgtgcgcgcagcggccgaaagc
cgcataccgctgatctcggccgtcggccacgagaccgactggacgctgatcgactatgcc
gccgatgtccgcgctccgacgccgaccggggcggcggaaatggccgtgcccgtcaaggcg
gagctcgaggcgcaggctgcggcgcttgccgcgcgcctgcagggctgtatgaaccggcag
atggatcagcgccgccagtccgtccgtagtctgatgcgggcattgccctcgctcgatcag
cttctcgccttgccgcgccgccgcttcgacgaggcggcggccagcctcggccgcggactg
gagctcaatacgatcaacaagcgccgcggcttcgagcgcgtcgccacacatctgcgcccg
gaccttctttccggtcgccttgccgagcgccgccagatgttgaacgagcggatggtgcgg
gccgagcgcatggtcgagcggctgatcgaccgctcgacatcgcgtgtcgagcgtgccgag
gcgatccttgcttcgctgccggcacggttgaaagcgcaaaccggccgctcccgcgaacgt
ctcggcaatctttcccgccatgccgatacggcgatccgccaccagctgacgcgcgcccgc
gccgagctctcggcgcaggatcgcgtgctgcagtcgctctcctacaagaacgtgctgaag
cgcggctacgccgtcattcgcgatgaggacaacaggccggtctcgcaagcggccgcactc
tccgccggcatgggcatcgccatcgaatttgccgacggccgtattggggctatgaccacg
gaaggcggcactccgcctggcggcaccaagaagcgcagcacaaaaccggcggagccgacg
aagcagggaagcctgttctaa
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