Rhizobium sp. N1341: AMJ98_CH00481
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Entry
AMJ98_CH00481 CDS
T04420
Name
(GenBank) ROK family transcriptional regulator protein
Organism
rhn
Rhizobium sp. N1341
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_24
MarR_2
MarR
HTH_Crp_2
Sigma70_r4
HTH_IclR
LacI
HTH_28
HTH_27
TrmB
DprA_WH
HTH_47
RepL
Rrf2
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
ANL08207
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Position
complement(480830..482077)
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AA seq
415 aa
AA seq
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MSSLDGPEHTPVPPPILNPAGGANQVRVRAYNERLVLSLVRLYGALSKADIARRSGLSAQ
TVSVIMRVLEKEGLLSRGAPVRGRVGQPSIPMHLNPDAVYSFGLKIGRRSADLVLMDFVG
RIRMQLHQTYAYPLPDEILAFVTSGIEEIESRLDDKQRSRIAGLGIAAPFELWNWAEEVG
APPGAMEVWRDVDLQADIAARVSHPVFLQNDATSACGAELVFGVGPSYPDFVYFFIGSFI
GGGIVLNSAIFSGRTGTAGAIGPLPVRDRNGETKQLLEIASIFVLENMLRERGIDPEPLW
YSADDWVDFGEPMEIWIQDTAKALAQAIVAAASIVDFSAAVIDGGFPDWVRSRVVQATID
EAAKLDLQGVVMPEIIEGAVGAQARAIGGASLPIFSRYLTDQNVLFKEIDHAEGT
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttggatgggccggaacacacaccggtcccgccgcccattctcaatccggcc
gggggtgcgaaccaggtcagggtgcgcgcctataacgaacggctcgtgctgtcgctggtg
cgcctctacggcgccctgtcgaaggccgatatcgcgcgccgcagcggcctgtcggcgcag
accgtctcggtcatcatgcgggtcctggaaaaggaagggctgctgtcgcgcggggcgccg
gtgcgcggccgggtcggccagccgtcgatcccgatgcatctcaatcccgacgccgtctat
tccttcgggctcaagataggccgtcgcagcgccgatctggtgctgatggatttcgtcggc
cgcatccgcatgcagctgcaccagacctatgcctatccgctgccggacgaaattctcgcc
ttcgtcacctcgggcatcgaggagatcgagagcaggctcgacgacaagcagcgcagccgt
attgccggcctcggcatcgcagctccgttcgagctctggaattgggccgaggaagtcggc
gcgccgccgggcgccatggaggtctggcgggatgtcgacctgcaggccgatatcgccgcc
cgtgtctcccatccggttttcctgcagaacgatgcgaccagcgcctgcggcgccgagctc
gtcttcggcgtcggcccctcctatcccgacttcgtctatttcttcatcggctccttcatc
ggcggcggcatcgtgctcaattcggcgattttttccggccgcaccggcacggcgggtgcc
atcgggccgctgcccgtgcgtgaccggaacggcgagaccaagcagctgctcgaaatcgcc
tcgatcttcgtgttggaaaacatgctgcgcgaacgcggcatcgatcccgagccgctctgg
tattctgccgacgactgggtggatttcggcgagccgatggaaatctggatccaggacacc
gccaaggcgctggcgcaggcgatcgtcgcggccgcctcgatcgtcgatttcagcgccgcc
gtcatcgacggcggctttcccgattgggtgcgcagccgcgtcgtccaggcgacgatcgac
gaagctgccaagctcgacctgcagggcgtcgtcatgcccgaaatcatcgagggcgcggtc
ggcgctcaggcgcgcgccatcggcggcgccagcctgccgatcttttcgcgttacctcaca
gaccagaacgtactcttcaaggagatagaccatgctgaagggacttga
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