Rhizobium sp. N1341: AMJ98_CH03632
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Entry
AMJ98_CH03632 CDS
T04420
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMJ98_CH03632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhn02000
]
AMJ98_CH03632
Transporters [BR:
rhn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AMJ98_CH03632
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Mg_chelatase
AAA
AAA_22
SRP54
SMC_N
AAA_29
AAA_16
AAA_25
AAA_30
Rad17
AAA_19
AAA_27
TOBE_2
AAA_5
PRK
AAA_28
NACHT
AAA_23
RsgA_GTPase
nSTAND1
TsaE
nSTAND3
AAA_14
AAA_33
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ANL11245
LinkDB
All DBs
Position
3694933..3695958
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AA seq
341 aa
AA seq
DB search
MFDAYLQLDKLTLRYGDTVAVRDLDLAIAKGELVALLGPSGCGKTTTMRAIAGLLKPASG
RIGLDGADITRVSANKRAVGLVFQSYALFPHLTVYENVAFGLRLKGISGADLDARVGAGL
KSVGLTSFAGRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRAELQR
VQKETGITMIFVTHDQVEALALADRIVVMLNGGIEQIGTPEEIYNNPASAFVADFVGFEN
VFALKDGKLLTPHGPAALSDPPPQAAAGLAWRPRTVTLGSGPFQGTVHGTSFAGNTREYL
LQTPLGPIKAEIDASLPPHEIGSALAFDLPVAGAANLKRFG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcctatctccaactcgataagctgacgcttcgctatggtgatacggtcgcc
gtgagggatctcgacctcgcgatcgccaagggcgagctcgtcgctcttctcggcccctcc
ggctgcggcaagacgacaacgatgcgcgccattgccggcctgctgaagccggcttccggc
cgcatcggtctcgacggcgccgatataacccgcgtctccgccaacaaacgcgccgtcggc
ctcgtcttccagtcctacgcgcttttcccgcatctgacggtctacgaaaacgtcgccttc
ggcctgcgcctcaagggcatttcgggcgcggacctcgatgcccgcgtcggcgccggcctg
aaatccgtcggcctgaccagcttcgctggccgaaagcccgccgaactctccggcggtcag
cagcagcgcgtcgcactggcgcgctccatggtgatggagccgaaggtgctgttgctcgac
gaaccgctctccaatctcgatgcccggcttcgtctcgaaatgcgcgcggaattgcagcgc
gtgcaaaaggagaccggtatcaccatgatcttcgtcactcacgaccaggtcgaggccttg
gcgctcgccgaccgcatcgtcgtgatgctgaacggcggcatcgaacagatcggcacgcct
gaggagatctataacaatcccgcctccgccttcgtcgccgatttcgtcggcttcgagaat
gtcttcgccctgaaggacggaaaactcttgacgccgcacggcccggcagcactctccgat
ccgccgccgcaagctgcagccggcctggcctggcgcccgcgtacggtgactctcggctcc
ggtccgttccagggtacggtgcacggcacgtctttcgcaggcaatacacgcgaatacctc
ctccaaacgccgcttgggcctatcaaggctgaaatcgacgcgagcctgccgccgcacgag
atcggcagtgcgctcgccttcgatctgccggtcgccggcgcggccaacctcaagcgcttc
gggtga
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