Rhizobium sp. N1341: AMJ98_PE00196
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Entry
AMJ98_PE00196 CDS
T04420
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn00730
Thiamine metabolism
rhn01100
Metabolic pathways
rhn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AMJ98_PE00196 (thiC)
Enzymes [BR:
rhn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AMJ98_PE00196 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ANL13421
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All DBs
Position
pRspN1341e:complement(195452..197284)
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AA seq
610 aa
AA seq
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MNIVAPQLTPVVTTGPLPASTKIVKPGALYPDLRVPMREISLHPTSGEPPVTVYDSSGPY
TDPAHVVSIDTGLPRLREAWVRARGDVEAYEGRVVKPEDNGFATGERLTPEFPIRNTPLK
AKAGRAVTQLAYARAGVITPEMEFIAIRENLGRQAAKEALARDGESFGAHVPDFVTPEFV
RREVAEGRAIIPANINHPETEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWAIRWG
ADTVMDLSTGRNIHNIREWIIRNSPVPIGTVPLYQALEKVNGIAEDLTWEVYRDTLIEQA
EQGVDYFTIHAGVRLAYIPLTVNRVTGIVSRGGSIMAKWCLHHHKESFLYEHFEEICDIC
RAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWARDCQVMIEGPGHVPMHKI
KENMDKQLKVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRSDVKTGVITYKIAAHAADLAKGHPAARIRDDALSRARFEFRWEDQFNLSLDPDTAR
SFHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGLEAMAAKYRDGGDLYMPV
AEVAKTPVGE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagttgcaccccagcttacccccgtcgtcaccaccggcccgcttccggcctcg
accaagatcgtcaaacccggagcgctctatccggatctgcgcgtgccgatgcgcgaaatc
agccttcacccgacctccggcgagccgccggtcacggtctatgattcctccggcccctat
accgatccggcccatgtggtttccatcgacaccgggctgccgcgtttgcgcgaggcctgg
gtcagggcgcgtggcgacgtcgaagcctatgaaggccgggtggtgaagcctgaagacaat
ggttttgccacgggcgaacggctgacgccggaatttcccattcgcaacacgccgctaaag
gcaaaggccggccgcgccgtcacccagctcgcctatgcgcgtgccggcgttatcaccccg
gaaatggagtttatcgcgatccgcgaaaacctcggccggcaggccgcgaaggaggcgctc
gcccgcgacggcgagagcttcggcgcccatgttccggatttcgtgacgcccgaattcgtg
cgccgggaagtcgccgagggcagggcgatcatccccgccaatatcaaccaccccgaaacc
gaaccgatgatcatcggccggaacttcctcgtgaagatcaacgccaatatcggcaattcg
gccgttacctcgtcgatggcggaggaggtggagaagatggtctgggcgatccgctggggc
gccgacacggtcatggacctttccaccggtcgcaacattcacaacatccgcgaatggatt
atacgcaattcgccggttccgatcggaacggtgccgctttaccaggcgctcgagaaggtc
aacggcattgccgaggatctgacctgggaagtctatcgggatacgctgatcgaacaggcc
gagcagggcgtcgactatttcaccatccatgccggcgtacggcttgcctatatcccgctc
accgtcaatcgcgtcaccggcatcgtctcacgcggcggctcgatcatggccaagtggtgt
ctgcatcaccacaaggagagtttcctctacgagcatttcgaggaaatctgcgatatctgc
cgcgcctatgacgtctccttctcgctcggcgacggtttgcgtccggggtcgatcgcggac
gccaatgacgcagcgcaatttgccgaactcgaaaccctcggcgaattgaccaagattgcc
tgggccagggattgccaggtgatgatcgaaggccccggccatgtgccgatgcacaagatc
aaagagaatatggacaagcagctcaaggtctgcggcgaagcccccttctatacgctcgga
ccgctgacgaccgacatcgcgccgggctatgatcacatcacctccggtatcggcgccgcc
atgatcggttggttcggcacggccatgctctgctacgtcacgccgaaggagcatctgggg
ctgcccgaccgcagcgacgtcaagaccggcgtcatcacctacaagatcgcagcgcatgct
gccgatcttgccaagggacatccggccgcccgcatccgcgacgacgcgctatcgcgcgcg
cgcttcgaattccgctgggaggatcagttcaacctctccctcgacccggatacggcccgt
tccttccacgacgagaccctgccgaaggaggcgcacaaggtggcgcatttctgttcgatg
tgcggcccgaaattctgctccatgagaatttcccacgacattcgcgccgaagctcagaaa
gagggattggaagccatggcggccaagtaccgcgatggcggcgatctctacatgccggtc
gcagaggtcgcgaaaacgcccgtcggagaatga
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