Roseburia hominis: RHOM_11190
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Entry
RHOM_11190 CDS
T01621
Name
(GenBank) RNA polymerase factor sigma-70
KO
K27000
RNA polymerase sigma-H factor
Organism
rho
Roseburia hominis
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rho03021
]
RHOM_11190
Transcription machinery [BR:
rho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RHOM_11190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_38
HTH_23
Sigma70_r4
HTH_29
HTH_28
HTH_50
HTH_30
HTH_16
HTH_Tnp_ISL3
Sigma70_ECF
DUF2285
HTH_10
Ubiq_cyt_C_chap
Motif
Other DBs
NCBI-ProteinID:
AEN97347
UniProt:
G2SXJ0
LinkDB
All DBs
Position
complement(2431649..2432317)
Genome browser
AA seq
222 aa
AA seq
DB search
MLRKIQPCAERLGGIAGQRGKTEEDVDEYQKLADEELIQKLREGDERIMDYILEKYKPLV
LRKANAMFLIGGDTDDLIQEGMIGLFKAIRDYRSDRETSFFHFAELCINRQLYSAVEASN
RKKHVPLNTYVSFYSQTTEEGKSLAETLLTDQMDDPEQLVIEQENFTAFWEQLREQLSAL
ERQVLDAYLEGKNYRQIAEELGKSPKTIDNALSRIKGKIRQR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaaaatacagccgtgcgcggaacgtttgggcggcatagcagggcagagaggg
aagacggaggaagacgtggacgaatatcagaagctggcggatgaagaactcatccagaaa
ctgcgcgaaggcgacgagcggatcatggattatatcctggaaaagtacaagccgttggtg
cttcgcaaggcaaatgcgatgtttttgattggcggagatacggatgacctgattcaggag
gggatgatcggactgtttaaggcaatccgggattaccggtccgacagggagacatccttt
ttccattttgcggaattgtgcatcaacagacagctctacagtgcggtggaggcatccaac
cggaaaaaacatgtacctctgaatacttacgtgtccttttattcccagaccacggaggaa
gggaaatctctggcggagacgcttctcaccgaccagatggacgatccggaacagctggtg
attgagcaggagaattttaccgctttctgggagcagctgcgggaacagttaagcgcgctc
gagcgccaggttttagacgcatatctggaaggaaaaaattaccgccagatagcggaggaa
ctcggaaaaagtcccaagacaatcgacaatgcgctctcgcgtatcaagggaaagatccgg
cagagatag
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