Rhodoferax sp. AJA081-3: HZ993_16070
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Entry
HZ993_16070 CDS
T08330
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
rhoa
Rhodoferax sp. AJA081-3
Pathway
rhoa00550
Peptidoglycan biosynthesis
rhoa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhoa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HZ993_16070 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhoa01002
]
HZ993_16070 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhoa01011
]
HZ993_16070 (dacB)
Enzymes [BR:
rhoa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HZ993_16070 (dacB)
Peptidases and inhibitors [BR:
rhoa01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HZ993_16070 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhoa01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HZ993_16070 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QTN26820
UniProt:
A0A975E7C5
LinkDB
All DBs
Position
complement(3429778..3431259)
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AA seq
493 aa
AA seq
DB search
MRLCRPFPPLLPTLQVAACALWFTLCSPAQAQGLPPEVDAALARAKIPREAMAVLLVDAQ
GQATPRVSHRASVAMNPASTIKLVTTFAALELLGPGYTWSTPVFIDGAVRDGTLYGNLTI
QGQGDPRLVLERLWLLLRRVQGLGIHTIAGDIILDNTAFAVPAIDPSAFDGEPLRPYNAA
PDALLLNFKSVVMTFVPEPGGTVARVQFDPPLAGVQLQTTVPLLAGECPDYRSALRADFS
DPKVIRFAGGYAQSCGERVWPVAYADPKTYATRAVQGLWQDMGGKLNGTVRMGSLPGTTA
AAYKPVFEMRSAPLAEIVRDINKYSNNVMAQQVYLTLGRVLTPPAPIAGIADAVTAPGSF
EASHKVVQRWWTERLGADDLPVLENGSGLSRNERISANGLGRLLQAAFVSPLMPDLMASL
PINGVDGTLRRAKTRSNGYAHLKTGSLNEVVAVAGYVHAAGGKRFVLVAIVNHPNARAAR
LAIDAMVDWASRQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctttgccgaccctttccacccctgctgcccacactccaagtcgccgcctgtgcc
ctgtggttcacgctgtgcagccctgcgcaagcacaaggtctgccccccgaggtggatgct
gcgttggcgcgggccaaaattccgcgggaggccatggccgtgctgctggtggatgcgcag
ggccaggccacgccgcgcgtcagccaccgcgccagtgtggccatgaaccctgcctccacc
atcaaactggtcaccacctttgccgcgctggagttgctgggacccggctacacctggtcc
accccggtttttatcgacggcgcggtgcgcgacggcacgctgtacggcaacctgaccatc
cagggccagggcgacccccggctggtgctggagcgcctgtggctgctgctgcgccgtgtg
cagggcctgggcatccacaccattgcgggtgacatcatcctggacaacacggcctttgcc
gtgccggccatagacccttccgcctttgacggtgaaccgctgcggccctacaacgctgcc
cccgacgccttgttgctcaacttcaaatccgtggtcatgacttttgtgcccgagcccggc
ggcacagtggcccgcgtgcagtttgacccgcccctggccggtgtgcagctgcagaccacg
gtgccgctgctggccggcgagtgcccggactaccgcagcgccctgcgcgccgacttcagc
gatcccaaagtgatacggtttgccggcggctacgcccagagctgcggtgaaagggtgtgg
cccgtggcctacgccgaccccaagacctatgccacacgcgccgtgcaaggcctgtggcag
gacatgggcggcaaactgaacggcacggtgcgcatgggtagcttgccgggcaccacggcg
gcggcctacaaaccggtctttgagatgcgctcggcaccactggccgagatcgtgcgcgac
atcaacaaatacagcaacaatgtgatggcccagcaggtctacctgacgctgggacgggtg
ctgacaccaccggcgcccattgcgggcattgcggacgcggtcaccgcgcccggcagcttt
gaggcatcccacaaggtggtgcagcgctggtggaccgaacgcctgggcgccgacgacctg
ccggttctggagaacggctcgggcctgtcgcgcaacgaacgcatcagcgccaacggcctg
ggccggctgctgcaggccgcatttgtttcgccgctgatgccggacctgatggcctcacta
cccatcaacggtgtggacggcacactgcgccgcgccaagacccgcagcaacggctacgcc
cacctgaagaccggcagcctgaacgaagtggtggcggtggccggttatgtacatgcggcc
ggtggcaaacgttttgtgctggtcgccatcgtcaaccaccccaacgcccgcgccgccagg
ctcgccatcgacgcgatggtggactgggcttccagacaatag
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