Rhodoferax sp. BAB1: HTY51_15800
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Entry
HTY51_15800 CDS
T08955
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhob
Rhodoferax sp. BAB1
Pathway
rhob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HTY51_15800 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhob03400
]
HTY51_15800 (xth)
Enzymes [BR:
rhob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HTY51_15800 (xth)
DNA repair and recombination proteins [BR:
rhob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HTY51_15800 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QKO23248
UniProt:
A0A6N0BWP8
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All DBs
Position
3259053..3259844
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AA seq
263 aa
AA seq
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MFKLVSLNLNGIRSATSKGLEAWLDQTRPDCMGVQEVKAQAGDVAGRFEELAGLRGYFHY
AEKKGYSGVGLYTRHEPSDVAIGYGSSEFDAEGRYVELRFDTPHNKFSLISCYFPSGSSG
EDRQLAKFRFLDEIYPHLQQLKQEREFILVGDVNIAHQEMDLKNWKGNLKNSGFLPEERA
WMTRLLNDGGLVDVYRQLHPDTTGEAYTWWSNRGQAYAKNVGWRIDYQLATPTLAQGARA
AEVYKGQRFSDHAPLCIDYDWRS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaactcgtcagcctcaacctcaacggcatacgctcggccaccagcaaggggctg
gaggcctggctggaccagactcgtccggattgtatgggcgtgcaggaggtcaaggcccag
gccggcgacgtggccgggcgcttcgaggaactcgccggcctgcgcggctacttccactac
gccgagaaaaagggctattcgggcgtgggcctctacacccggcacgagcccagcgacgtg
gccatcggctacggctcctccgaattcgatgccgagggccgatacgtggaactgcgtttc
gacacgcctcacaacaagttctcgctgatcagctgctacttccccagcggctcctcgggc
gaggaccggcagttggccaaattccgcttcctcgacgaaatctatccgcacctgcagcag
ctcaagcaggaacgtgaattcatcctggtgggcgacgtcaacatcgcgcaccaggagatg
gatctgaagaactggaagggcaacctcaagaactcgggtttcctgcctgaggagcgcgcc
tggatgacgcggctgctgaacgacggcggcctggtcgacgtctaccgccagctgcatccc
gacaccacgggtgaggcctacacttggtggagcaaccggggccaggcctatgccaagaat
gtgggctggcgtatcgactaccagctggccacgccgacgctggcgcagggcgcgcgggca
gccgaggtttacaagggacagcgtttcagcgatcacgcccccctgtgtatcgactacgac
tggcggtcctga
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