Rhodobacter sp. LPB0142: LPB142_10650
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Entry
LPB142_10650 CDS
T04631
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rhp
Rhodobacter sp. LPB0142
Pathway
rhp00550
Peptidoglycan biosynthesis
rhp01100
Metabolic pathways
rhp01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LPB142_10650
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LPB142_10650
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rhp01003
]
LPB142_10650
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhp01011
]
LPB142_10650
Enzymes [BR:
rhp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LPB142_10650
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LPB142_10650
Glycosyltransferases [BR:
rhp01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LPB142_10650
Peptidoglycan biosynthesis and degradation proteins [BR:
rhp01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LPB142_10650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
DUF4398
Motif
Other DBs
NCBI-ProteinID:
AOZ69719
UniProt:
A0A1D9MDA3
LinkDB
All DBs
Position
complement(2178529..2181087)
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AA seq
852 aa
AA seq
DB search
MIRFLLSSIGGLFSWIVTALFFAALTIGAIFWMYSRNLPSHEQLAQYTPKTISRIYSGEG
RLIDEFAEERRIFVPINDMPDLVKNAFVSAEDKNFWVHKGYDARGMIAAMVDAVRSGGKE
MRGASTITQQVMKNFLLSSDRSVERKIKELILASRVEEALSKDRILELYLNEIFLGQNSY
GVAAAAQTYFNKTLAQLDVAEAAYLAALPKKPAQLHPVRNYEEARLRRNYVLRRMYEDGY
IDQPTMEAAQASELKTVQRGDYAPFRDQLPPRDYFTDEIRRQLSKTFGHDEFFGGGLTIR
ATVNPDMQSAAAKALQEALEKYDRGQGVWRGTGAVIGADRLGTEADWRAALAEVPTDKAP
RDIEGWHPAVVLELGDSAARIGIEGIAEDEDGHWIPAEDVTWARKRLEGGKLGPRARKAG
DLVSVGDVVLVRALGGDGADFKRWSLRQVPVVEGAFMAMDVNTGRVIAMQGGFSYQASVF
NRTTQAQRQPGSNFKPFVYAAALDSGFAPETVVVDAPIEVNTPQGLWRPKNASNKYYGPT
PMRTGLEQSRNLMTVRIAQEIGMETVAQYAEKFGVYNPMKPFLANALGSQETTMYQIVSA
YAMFANGGERVEPTLVDRVQDRWGRTIYRHDQSVCEDCADEVLPAGLGPRVRTDRERVID
PITAYQMISLMEGVVKRGSGSGVNLPVPVAGKTGTTNDAKDVWFTGFTSNIVASCYMGFD
QPRSLGPGAYGGTLCVPVFNAFMKEAVKEYGGSKFKVPPGGHWVKFNRFTGERLSDDATG
DFVQAEYLRDGQEQMAGLGLVVDGGFAMGADLPLFAQGETDEGDATVTTSTGKTKVIPKK
ADFGTVSSGGLY
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgttttcttctgtcctcgatcggtggtctgttctcgtggatcgtcaccgcgttg
ttcttcgcggcgctgacgattggtgcgattttctggatgtattcgcgcaatttgccgagc
catgagcagctcgcgcaatatacccccaagacgatctcgcggatctacagcggcgagggc
cgtttgatcgacgaattcgccgaggagcggcggatcttcgtgccgatcaacgacatgccc
gacctcgtgaagaacgccttcgtctcggccgaggacaagaatttctgggtgcacaagggc
tatgacgcgcgcggcatgatcgcggcgatggtcgatgcggtgcgttcgggcggcaaggag
atgcgcggcgcctcgacgatcacccagcaggtgatgaagaacttcctgctctcctccgac
cgttcggtcgagcgcaagatcaaggagttgatcctggcgagccgggtcgaggaggcgctc
tcgaaggaccgcattctcgagctctatctcaacgagatcttcctcgggcagaactcctac
ggcgtggccgcggctgcgcagacctatttcaacaagacgctggcgcagctcgatgtggcc
gaggccgcctatctcgccgcgctgccgaaaaagcccgcgcagctgcacccggtgcgcaat
tatgaagaggcgcggctgcggcgcaattatgtgctgcggcggatgtatgaggacggctat
atcgaccagccgacgatggaggccgcgcaggcgagcgagctcaagaccgtgcagcgcggc
gattatgcgccgttccgcgaccagctgccgccgcgcgattatttcaccgacgagatccgc
cgccagctttccaagaccttcggccatgatgagttcttcggcggcggtctgacgatcagg
gcgaccgtcaaccccgacatgcaatcggccgccgccaaggcgctgcaggaggcgctcgag
aaatatgaccgcgggcagggcgtctggcgcggcaccggcgcggtgatcggggccgacagg
ctcggcaccgaggccgactggcgcgccgcgctggccgaggtgcccaccgacaaggcgccg
cgcgatatcgagggctggcacccggcggtggtgctcgagctgggcgacagcgccgcgcgg
atcggcatcgagggtatcgccgaggatgaggacgggcattggatcccggccgaggatgtc
acctgggcgcgcaagcggctcgagggtggcaagctcgggccgagggcgcgcaaggcgggc
gatctcgtttcggtgggcgatgtggttctggtgcgcgcgctcggcggcgacggggccgat
ttcaagcgctggtcgctgcgtcaggtgccggtcgtcgagggcgccttcatggcgatggat
gtcaacaccggtcgcgtgatcgcgatgcagggcggcttctcctatcaggcctcggtcttc
aaccgcaccactcaggcgcagcgccagccgggctcgaacttcaagcccttcgtttacgcc
gccgcgctcgattcgggcttcgcgcccgagaccgtcgtcgtcgacgcgccgatcgaggtg
aacacgccgcagggcctgtggcgcccgaagaacgcctcgaacaaatattacggcccgacg
ccgatgcgcaccgggctcgaacaatcgcgcaacctgatgacggtgcggatcgcgcaagag
atcggcatggagacggtggcgcaatatgccgagaagttcggcgtctacaacccgatgaaa
ccgtttctcgccaatgccttgggctcgcaggagaccacgatgtatcagatcgtgagcgcc
tatgcgatgttcgccaatggcggcgagcgggtggagccgacgcttgtggaccgggtgcag
gaccgctggggccgcaccatctaccgccatgaccagagcgtgtgcgaggattgcgccgac
gaggttctgccggccggcctcgggccgcgggtgcgcaccgaccgcgagcgggtgatcgac
ccgatcaccgcctatcagatgatctcgctgatggagggtgtggtgaaacgcggctcgggt
tccggggtcaacctgccggtgcccgtcgcgggcaagaccggcaccacgaatgacgcgaaa
gacgtgtggttcacgggctttacctcgaatatcgtggcgagctgttacatgggctttgac
cagccgcgctcgctcgggcccggcgcctatggcggcacgctctgtgtgccggttttcaac
gctttcatgaaagaggcggtgaaggaatatggcggctcgaagttcaaggtgccgccgggg
gggcattgggtgaagttcaaccgcttcaccggcgagcggctctccgacgatgcgacgggc
gatttcgtgcaggcggaatatctgcgcgacggtcaggagcagatggcggggctcggcctc
gtggtcgatggcggctttgcgatgggcgccgatctgccgctctttgcgcagggcgagacc
gacgagggcgatgcgacggtcaccacctcgacgggcaagaccaaggtgatcccgaagaag
gccgatttcggcacggtgagctcgggcgggctttactga
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