Rhodococcus sp. PBTS 1: A3Q40_02887
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Entry
A3Q40_02887 CDS
T05182
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu00061
Fatty acid biosynthesis
rhu00071
Fatty acid degradation
rhu01100
Metabolic pathways
rhu01212
Fatty acid metabolism
rhu02024
Quorum sensing
Module
rhu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A3Q40_02887 (fadD)
00071 Fatty acid degradation
A3Q40_02887 (fadD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3Q40_02887 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhu01004
]
A3Q40_02887 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhu04147
]
A3Q40_02887 (fadD)
Enzymes [BR:
rhu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A3Q40_02887 (fadD)
Lipid biosynthesis proteins [BR:
rhu01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
A3Q40_02887 (fadD)
Exosome [BR:
rhu04147
]
Exosomal proteins
Exosomal proteins of breast milk
A3Q40_02887 (fadD)
Exosomal proteins of breast cancer cells
A3Q40_02887 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AMY20250
UniProt:
A0A143QAW9
LinkDB
All DBs
Position
complement(3108750..3110354)
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AA seq
534 aa
AA seq
DB search
MQTNGTVIDAWRRRVDGHPDAPALAWFDAVLTAGEVDDLSDGIAAALADRGVVRGDRVAL
HLQNVPHYALLFLAIWKLGAAAVLVNPMYRGRELRVLLDDSEPVLLVCADYDADALLAEC
RDTTVRGVLSVNARDFQTRDDERVFTRPASEPRDDDLLTAVAPGRPNGPDPASEEVALLA
YTSGTTGPPKGAMVSHANLLATATDFGDRARVRDGAVVFAAAPLFHITGAVLNAAVALVR
DTTLVFAGRFDAGVTLDALVEHRVTYTIGSITVFNALSAHPDATRSHFASLETVYSGGAP
IPPATVAAFEERFGHYIHNAYGMTETTAGVIAVPPGERAPVDPGSGSLSVGRPLPRAQVR
TVDDSGAPTAPGVPGELEVAGPQVVSGYWRKPDATASAMPGGRMRTGDVAVIDADGWVYL
VDRLKDQINVSGYKVWPREVEDVLYEHPAVFEAAVVGRPDDYQGESVVAYVALRADVAAT
GDELVEFARSRLAAYKRPRTVHVVTDLPKTLTGKIRRAALADRALPTRTGSESS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgaacgggacggtgatcgacgcctggcgtcgacgtgtggacgggcatccggac
gcgccggcgctggcctggttcgacgccgtgctcacggcgggcgaggtcgacgacctctcc
gacggcatcgctgcggcgctggccgaccgcggcgtcgtgcgtggcgaccgggtggcgctc
cacctgcagaacgtgccccactacgcactcctgttcctcgcgatctggaagctcggcgcc
gcggccgtgctggtcaacccgatgtaccgaggacgcgaactgcgggtgctgctggacgac
tccgagccggtgctgctggtgtgcgccgactacgacgccgacgccctgctcgcggaatgc
cgtgacacgacggtgcggggcgtcctcagcgtgaacgcgcgggacttccagacgcgggac
gacgagcgcgtgttcacccggccggcatccgagccgcgcgacgacgacctgctgaccgcc
gtggcgccgggccggccgaacggacccgatccggcgtcggaggaagtggccctgctcgcc
tacacctccgggaccacgggaccgcccaagggcgccatggtctctcacgccaacctgctc
gcgaccgccaccgacttcggcgaccgtgcgcgcgtacgggacggtgcggtggtcttcgcc
gccgcgccgctgttccacatcacgggtgccgtcctgaacgcggcggtcgcgctggtgcga
gacacgacgttggtgttcgcgggacggttcgatgcgggcgtcaccctcgacgccctggtg
gagcaccgcgtgacgtacacgatcggctcgatcaccgtcttcaacgcattgtcggcccac
ccggacgcgacgcggtcccatttcgcttctctcgagacggtgtattcgggtggtgcgccc
atcccacccgcgacggtcgccgcattcgaggagcggttcggtcactacatccacaacgcg
tacggcatgaccgagacgacggccggcgtgatcgcggtgccgccgggggagcgcgcgccg
gtggatccgggcagtggctccctctcggtcggccggcccctgccccgagcgcaggtccgc
acggtggacgactccggtgccccgaccgcgcccggcgttcccggcgagctggaagtcgcg
gggccgcaggtggtctcgggatactggagaaagcccgacgccacggcctctgcgatgccg
ggcggccgtatgcgtacgggcgacgtcgcggtgatcgatgccgacgggtgggtctacctc
gtggaccggctgaaggaccagatcaacgtgtccggctacaaggtgtggccgcgcgaggtg
gaggacgtgctctacgagcaccccgccgtcttcgaagccgcggtcgtcgggcgacccgac
gactaccagggcgagtccgtcgtggcgtacgtcgccctgcgagccgacgtggccgcgacc
ggcgacgagttggtcgagttcgcccggtcccggctcgccgcgtacaagcgcccccgcacc
gttcacgtcgtcaccgatctccccaagaccctcacgggcaagattcgccgggccgcactc
gcggaccgggccctccccacccgcaccggaagcgagtcgtcatga
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