Rhodococcus sp. PBTS 1: A3Q40_03272
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Entry
A3Q40_03272 CDS
T05182
Symbol
dacB_2
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu00550
Peptidoglycan biosynthesis
rhu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A3Q40_03272 (dacB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhu01002
]
A3Q40_03272 (dacB_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhu01011
]
A3Q40_03272 (dacB_2)
Enzymes [BR:
rhu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A3Q40_03272 (dacB_2)
Peptidases and inhibitors [BR:
rhu01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
A3Q40_03272 (dacB_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhu01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
A3Q40_03272 (dacB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
AMY20633
UniProt:
A0A143QBQ3
LinkDB
All DBs
Position
complement(3513689..3515089)
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AA seq
466 aa
AA seq
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MGKARGSMRSRLRSRWGIAAVVVVLIAGIVGVAAVTPTFTEPESPVVAAPEPDPVVATPA
VSPVPADAPRPNPAALAATLAAPLRNPDLGRFTGSVADAITGEVLWSVDPDAAMTPASTT
KILTAAAAMLALPSDHRVTTKVVQGDRPGQVILVGEGDPTLTAQPVGTPGFYDGGARIDD
LADQIRRSGAQVSSIGVDLGAYSGPSSAEGWFPGDVAAGYIAPIEPLTLDGGRTVPTVDE
SPRSATPGLDTGRALARALGLDPAVVTAASAPSGAGSLATVQSAPLRQRLGQMLGFSDNV
LAEAVGREVAAAEGAPASFDGATDAVLATLRDNGVDVAGVRLADTSGLSVDNRIPARVLS
SIVTAAAGPVDGRTHADALRPMLDYLPVAGATGTLAARYASGDRTAAGWLRAKTGTLSNA
SALAGYVVDESGRVLTFALMSNDRPPDVGRPALDAVASTLRSCGCT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaaggccagaggctcgatgcgctcgcgtctgcgcagtcgctggggcatcgcggcc
gtcgtcgtggtcctgatcgccggcatcgtcggcgtcgccgccgtgaccccgacgttcacc
gagccggagtcgccggtggtcgcggcccccgagcccgatcccgtcgtggcgaccccggcg
gtctcgcccgtccccgccgacgccccgcggccgaacccggccgccctcgccgccacgctg
gccgcgccgctccgcaatccggatctgggccgcttcaccgggtcggtcgcggacgcgatc
accggcgaggtgctgtggagcgtcgaccccgacgccgcgatgacgcccgcgtcgaccacc
aagatcctcacggcggcggcggcgatgctcgcgctgccgtccgaccaccgggtcaccacc
aaggtggtccagggcgaccgcccgggccaggtgatcctggtcggggagggcgaccccacg
ctgacggcgcagccggtcggcacgccggggttctacgacggcggcgcccgtatcgacgat
ctcgcggaccagatccgtcgctcgggcgcgcaggtgagttcgatcggggtcgacctcggt
gcgtacagcggaccgtcgtcggccgaggggtggtttcccggcgacgtcgccgccgggtac
atcgcacccatcgagccgctgacgctcgacggcggacgcacggtcccgacggtcgacgaa
tctcctcgcagcgccacccccggtctcgacaccggacgcgcgctcgcccgcgcgctcggc
ctcgacccggccgtcgtgaccgccgcatccgcgccgagcggagccggatcgctcgccacc
gtgcagtccgctccgctgcgccagcggctcggtcagatgctcggtttctccgacaacgtg
ctggccgaggcggtcggacgcgaggtcgcggcggccgagggcgcgccggcgtcgttcgac
ggcgccaccgacgcggtgctggccaccctgcgggacaacggcgtcgacgtggccggcgtg
cgactcgccgacacgagcggactgtcggtggacaaccgcatccctgcgcgcgtgctgtcg
tcgatcgtcaccgcggccgccggaccggtggacggtcgtacgcacgccgacgccctccgg
ccgatgctggactacctgccggtggccggggcgacggggacgctcgccgcgcgctacgcc
tcgggcgatcgcaccgcggcggggtggctgcgggccaagacgggaacgctgtcgaatgcc
agtgcgttggccgggtacgtcgtcgacgagagcgggcgagtcctgacgttcgcgttgatg
tccaacgaccgaccgccggacgtgggccgaccggccctggacgccgtggcgtcgacgctg
cggtcgtgcggctgcacgtga
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