KEGG   Rhodoferax koreense: RD110_01330
Entry
RD110_01330       CDS       T04721                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rhy  Rhodoferax koreense
Pathway
rhy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RD110_01330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhy03400]
    RD110_01330
Enzymes [BR:rhy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RD110_01330
DNA repair and recombination proteins [BR:rhy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RD110_01330
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 Glyco_hydro_47 DUF383
Other DBs
NCBI-ProteinID: APW40399
UniProt: A0A1P8K324
LinkDB
Position
complement(287424..288245)
AA seq 273 aa
MFKLTSLNLNGIRSATTKGVEAWIAATGPDCICVQEVKAQAADVRGRFEQLAGLQGHFHF
AEKKGYSGVAVYSKHVPSEVVTGYGSAEFDAEGRYVELRFDTPTRKLSVISCYFPSGSSG
ELRQQAKFRFLAEFLPHLARLKATREFILCGDVNIAHREMDLKNWRSNQKNSGFLPEERA
WMTHLLARADLDPLAADGLGLVDVYRLLQPDTTDTAYTWWSNRGQAYANNVGWRLDYHLA
TPATAALARSEHIYKDVKFSDHAPLTVEYDMVI
NT seq 822 nt   +upstreamnt  +downstreamnt
ttgttcaagttaaccagcctcaatctcaacggcatccgctccgccaccaccaagggtgtc
gaagcctggattgccgcgaccggcccagattgtatttgtgtccaggaagtcaaggcccag
gccgccgacgtgcgcggccgcttcgaacaactggccggcctgcagggccatttccacttc
gccgagaagaaggggtattcgggcgtggccgtgtacagcaagcatgtgccgagcgaggtc
gtgacgggctatgggtcggccgaattcgacgccgaaggccggtatgtggagttgcgcttc
gacacgccgacgcgcaagctatcggtcatcagctgctatttccccagcggctcctcgggt
gaactgcgccagcaggccaaattccgcttcctcgcggagttcctgccgcacctggcgcgg
ctcaaggccacgcgtgagttcatcctgtgcggcgacgtgaacatcgcgcaccgcgaaatg
gatctgaagaactggcgcagcaaccagaagaacagcggcttcctgcccgaggagcgcgcc
tggatgacccacctgctggcccgtgccgacctcgacccgctggccgccgacggcctgggc
ctggtcgacgtctaccgcctgctgcaacccgacaccaccgacaccgcctacacctggtgg
agcaaccgcggccaggcgtatgcgaacaacgtgggatggcggctcgactaccacctggcg
acacccgccacggcggcgctggcgcgcagcgaacacatctacaaggacgtgaagttcagc
gaccacgcaccgctgaccgtcgaatacgacatggtcatctga

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