Rhodoferax koreense: RD110_26440
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Entry
RD110_26440 CDS
T04721
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rhy
Rhodoferax koreense
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhy03032
]
RD110_26440
Enzymes [BR:
rhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RD110_26440
DNA replication proteins [BR:
rhy03032
]
Prokaryotic type
DNA Topoisomerases
RD110_26440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
SWIB
Toprim
OrfB_Zn_ribbon
PADR1_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
APW40302
UniProt:
A0A1P8K2S3
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All DBs
Position
5726358..5729297
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AA seq
979 aa
AA seq
DB search
MTKTLVIAEKPSVAQDIVRALTPTAGKFDKHEDHFENESYVVTSAVGHLVEIQAPEQFDV
KRGKWSFANLPVIPPFFDLKPVDKTKSRLNAVVKQAKRKDVTKLINACDAGREGELIFRL
IEQYAGGAKPLGKPVQRLWLQSMTPQAIRDGFGQLRNEQQMQGLADAARSRSEADWLVGI
NGTRAMTAFNSRDGGFFLTTVGRVQTPTLSVVVEREEKIRKFVSRDYWEVHGTFQAEAGQ
YPGKWFDPAWKKPPPGPDGVPDPEQRADRVWNEREARAIADAARGQPATVTEESKPTTSA
SPALFDLTSLQREANSRFGFSAKTTLALAQSLYERHKALTYPRTDSRALPEDYLPVVKDT
MKMLAESGMKHLAPFAKQAVDGNYVKPIKRIFDNAKVSDHFAIIPTLQAPSGLSEAEQKL
YDFVVRRFLSVFFPSAEYQVTTRISTVVQGDKKYPFRTDGKVLVKPGWLAIYGKEAVNDE
DEKDGKNLVIVKPGEVVRTESAELKGLKTRPPARYSEATLLGAMEGAGKTIDDDELREAM
QEKGLGTPATRAATIEGLIAEKYMLREGRELIPTAKAFQLMTLLRGLGVEELSKAELTGD
WEYKLAQMEKGALSRETFMREIAQMTEHIVKKAKEYDRDTVPGDYATLSTPCPNCGGVVK
ENYRRYTCTGLPGQPEGCGFSFGKSPAGRTFELAEAEALLRDKHVGPLDGFRSKAGWPFT
SEIVLKFDEEAKNFKLEFDFGDDKNAESGEIVDFSQQDTLGPCPICGANVFEHGSNYVCE
KAVPTHDQPTPSCTFKSGKIILQQPVEPAQMEKLLATGKTDLLDKFVSMRTRRAFKAFLA
WDAEAGKVNFEFAPSKFPPRKTAAGAAPARAAAGKTAAKKVAGKSAAKSAAKTAVKKAPR
KTPAGGGLKPSDALAAVIGAEPVARTEVVKKMWDYIKANNLQDATNKRAINADAKLLPVF
GKPQATMFELAGIIGKHLS
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaccctggtgattgcagagaaaccgtcggtggcgcaggacatcgtgcgcgcg
ctcacgccgacggccggcaagttcgacaaacacgaagaccatttcgagaacgaaagctac
gtcgtgaccagcgccgtgggccacctggtggaaatccaggcccccgagcagttcgacgtg
aagcgcggcaagtggagcttcgccaacctgccggtgatcccgccgttcttcgacctcaag
ccggtggacaagaccaagtcgcgcctgaacgcggtggtgaagcaggccaagcgcaaggat
gtgacgaagctcatcaatgcctgtgacgcgggccgcgagggtgaactgatcttccgcctg
atcgagcagtacgccggcggcgccaagccgctcggcaagcccgtgcagcggctgtggctg
caatcgatgacgccgcaggccatccgcgacggcttcggtcagctgcgcaacgaacagcag
atgcagggcctggccgacgcggcgcgttcgcgctccgaggccgactggctggtcggcatc
aacggcacccgcgccatgaccgccttcaactcgcgcgacggcggcttcttcctcaccacc
gtcggccgggtgcagacgcccacgctgtcggtggtggtagagcgcgaggagaagatccgc
aagttcgtgagccgcgactactgggaagtgcacgggacgttccaggctgaggccggccag
taccctggcaagtggttcgacccggcctggaagaagccgccgcccggcccggacggcgtg
cccgatcccgagcaacgtgccgaccgggtgtggaacgagcgcgaggcccgcgccatcgcc
gacgcggcacggggccagcccgccaccgtcaccgaggaaagcaagcccacgacctcggcc
tcgcccgcgctgttcgacctgacctcgctgcagcgcgaggccaacagccgcttcggcttc
agcgccaagaccacgctggcactggcgcaaagcctgtacgagcggcacaaggcgctgacc
tatccgcggaccgattcgcgcgccctgcccgaggactacctgccggtcgtcaaggacacg
atgaagatgctcgcggaaagcggcatgaaacacctggcgccgttcgccaagcaggccgtg
gacggcaactacgtgaagccgatcaagcgcatcttcgacaacgccaaggtgagcgatcac
tttgcgatcatccccacgctgcaggcaccgagtggcctgtcggaggccgagcaaaagctg
tacgacttcgtggtgcggcgtttcctttcggtgtttttcccgagtgccgagtaccaggtc
acgacacgcatcagcaccgtcgtgcaaggcgacaagaagtacccgtttcgcaccgacggc
aaggtgctggtcaagccgggctggctggcgatctacggcaaggaagccgtgaacgacgag
gacgagaaggacggcaagaacctggtgatcgtgaagcccggcgaagtggtccgcaccgaa
tccgccgaactcaagggcctgaagacgcggccccccgcacgttattcggaagccacgctg
ctcggcgccatggaaggcgcgggcaagaccatcgacgacgacgagctgcgcgaagccatg
caggaaaaaggcctgggtacgccagccacgcgcgcggccaccatcgaagggctgatcgcc
gagaaatacatgctgcgcgaggggcgcgagctgatccccacggccaaggccttccagctc
atgacgctgctgcgcggcctgggcgtggaggaactctccaaggccgaactcaccggcgac
tgggaatacaagctcgcgcagatggaaaagggcgcgctgagccgcgagaccttcatgcgc
gaaatcgcgcagatgacggaacatatcgtcaagaaggccaaggaatacgaccgcgacacc
gtccccggcgactacgccaccctgtccacgccctgccccaactgcggcggcgtggtgaag
gaaaattaccgccgctacacgtgcaccggcctgcccgggcaacccgaggggtgcggcttc
tcgttcggcaaatcgccggcgggccggactttcgagctggccgaggccgaggccctgctg
cgcgacaagcacgtcggcccattggacggcttccgctccaaggccggctggccgttcacc
tcggagatcgtgttgaagttcgacgaagaggcaaagaacttcaagctggaattcgacttc
ggggacgacaagaatgccgagtcgggcgagatcgtcgatttcagccagcaggacacgctc
ggcccctgcccgatctgcggcgccaacgtgttcgagcacggcagcaactacgtctgcgaa
aaggccgtgccgacccacgatcagcccacgccgagctgcaccttcaagagcggcaagatc
atcctgcagcagccggtggagcctgcgcagatggaaaagctgctcgccaccggcaagacc
gacctgctcgacaaattcgtcagcatgcgaacgcgccgcgcgttcaaggccttcctggcc
tgggacgcggaagccggcaaggtgaacttcgaattcgcgccgagcaaattcccgccgcgc
aagacggccgcaggggccgcgccggcacgtgcggccgccggcaagaccgccgcgaaaaag
gtggcgggcaagagcgccgctaaatccgcggccaagaccgccgtgaagaaagccccgcgc
aagacgccggccggcggcggactgaagccgagcgacgcattggctgcggtgatcggcgcc
gagccggtggcgcgcacggaggtggtcaagaagatgtgggactacatcaaggccaacaac
ctgcaggacgcgaccaacaagcgcgccatcaacgcggatgcgaaactgctgccggtgttc
ggcaagccgcaggcgacgatgttcgagctggccggcatcatcggcaagcacctgagctga
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