Rhizobium indigoferae: U5G49_003003
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Entry
U5G49_003003 CDS
T09660
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rif
Rhizobium indigoferae
Pathway
rif02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U5G49_003003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_003003
Transporters [BR:
rif02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
U5G49_003003
BRITE hierarchy
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
ABC_ATPase
SMC_N
AAA
AAA_22
Rad17
AAA_25
sCache_3_2
DO-GTPase2
nSTAND3
AAA_28
Rop
RsgA_GTPase
NB-ARC
AAA_14
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WQN37858
LinkDB
All DBs
Position
2977971..2979032
Genome browser
AA seq
353 aa
AA seq
DB search
MSFLTLNNIQKSFGPVQVVKNFNMTIEKGEFISFLGPSGCGKTTVLRMIAGFETPTGGTL
TINGKDQSSLKPNQRNIGMVFQAYALFPNMTVHDNVAFGLKVAGAPKPEIDARVKEMLGL
IKLDHLADRFPYQLSGGQQQRVALARALAVKPQVLLLDEPLSALDAKIRVSLREEIRQIQ
QQLGITTVFVTHDQEEALSISDRIVVMNAGKADQIGSPFEIYNTPATRFVASFVGTLNLI
EAKVVDPDTNRIQIGDQGITLKQSVAAHKAGETISLALRPEAGSLSDSVKSDTALTGQVV
SAHFLGSVIRTRMNVGGNVISFDMFNSPGTTPPQAGETVTLRFMAADLLIIRD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttctcacgctgaacaacattcagaaatccttcggcccggttcaggtcgtcaag
aacttcaacatgacgatcgagaagggtgagttcatctccttcctcggaccgtcgggctgc
ggcaagacgaccgtcctgcgcatgatcgccggctttgaaacgccgactggcggcacgctg
accatcaacggcaaggatcagagttcgctgaagccgaaccagcgcaatatcggcatggtg
ttccaggcctacgcgctgttccccaacatgacggtgcacgacaacgtcgccttcggcctc
aaggtggcaggcgccccgaagcctgagatcgacgcccgcgtcaaggaaatgctcggcctg
atcaagctcgatcacctggccgaccgcttcccctatcaactgtcgggcggccagcagcag
cgtgtcgcccttgcccgtgcgcttgctgtcaagccgcaggtgctgctgctcgacgagccg
ctctccgcactcgacgccaagatccgcgtgtcgctgcgcgaggaaatccgccagatccag
cagcagctcggcatcaccacagtcttcgtcacccatgatcaggaagaggccctgtcgatc
tccgaccgcatcgtcgtcatgaatgccggcaaagccgaccaaatcggttcgcccttcgag
atctacaatacgccggcgacgcgcttcgtagcctccttcgtcggcacgctgaacctcatc
gaggccaaggtcgtcgatcccgataccaaccgcatccagatcggcgatcagggcataacg
ctgaagcagtccgtcgccgcccacaaggccggcgaaaccatttcgctagccctgcgtccg
gaagccggctcgctctccgacagcgtcaagagcgacacggcgctgaccggtcaggtcgtt
tcggcccattttctggggtcggtcattcgcacccgcatgaatgttggcggcaacgtcatc
tccttcgacatgttcaacagcccgggcaccaccccgccgcaggccggcgaaacggtaacg
ctgcgcttcatggcagccgacctgctcatcatccgcgactaa
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