Rhizobium indicum: FFM53_020900
Help
Entry
FFM53_020900 CDS
T07009
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rii
Rhizobium indicum
Pathway
rii00470
D-Amino acid metabolism
rii00550
Peptidoglycan biosynthesis
rii01100
Metabolic pathways
rii01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FFM53_020900
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FFM53_020900
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
FFM53_020900
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rii01011
]
FFM53_020900
Enzymes [BR:
rii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
FFM53_020900
Peptidoglycan biosynthesis and degradation proteins [BR:
rii01011
]
Precursor biosynthesis
Amino acid ligase
FFM53_020900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
GARS_A
ATP-grasp_3
Arg_repressor
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
QKK18765
LinkDB
All DBs
Position
4307687..4308613
Genome browser
AA seq
308 aa
AA seq
DB search
MSRKHVAVLMGGFSSERPVSLSSGKACAEALEAEGFDVTRIDVARDVSEKLAALKPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKDKAKLVAGAAGIPVAESQVVNR
FAFPSTHPMKPPYVVKPVREGSSFGVVIVTEDQAHPPQIVSSPEWRYGEEVLVERYVYGR
ELTCGVMGETPLGVTEVVPQGHNFYDYDSKYAAGGSKHVIPAKISPNIYQKIQTLSLRAH
QAIGCRGVSRSDFRYDDRFSEDGEIIWLEVNTQPGMTPTSLVPEMAGHAGYSFGRFLRWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaagcatgtcgctgtcctgatgggcggattttcctcggaaaggcctgtcagc
ctttcctcgggaaaggcttgcgcagaagctctcgaggcagagggcttcgacgtgacgcgc
atcgacgtggcgcgcgacgtttccgagaagcttgccgcgctgaagcccgatgtcgtcttc
aatgcgcttcacggcccgttcggcgaggacggcaccattcagggcatcctcgaatatctc
gagatcccctatacgcattcgggcgtgcttgcctcggcgctggcgatggacaaggacaag
gcgaagctcgttgccggcgccgccggcattccggtggccgaatcacaggtggtcaaccgt
ttcgcctttccctcgacgcatccgatgaagccgccctatgtggtgaaacccgtccgcgaa
gggtcgagcttcggcgtcgtcatcgtcaccgaagatcaggcgcatccgccacagatcgtc
agctcgcccgaatggcgttacggtgaagaggtgctcgtcgagcgctatgtttacggtcgc
gagctgacctgcggtgtcatgggcgaaactccgcttggtgtcacggaagtggtgccgcag
ggacacaatttctatgattacgactccaagtatgcggcaggcggttcaaaacacgtcatc
cccgcgaaaatttcaccgaatatttaccaaaaaatacaaacattgtccctaagggcgcat
caggcaatcggttgtcgcggcgtcagtcggtccgactttcgttacgacgatcgtttctcc
gaagacggcgaaatcatctggctggaggtcaatacccagccagggatgactccaacctcg
ctcgtgcccgaaatggccggccatgccggctattcctttggtcggtttctccggtggatg
gtggaggacgcgtcttgtttgcgttga
DBGET
integrated database retrieval system