KEGG   Rhizobium indicum: FFM53_020900
Entry
FFM53_020900      CDS       T07009                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rii  Rhizobium indicum
Pathway
rii00470  D-Amino acid metabolism
rii00550  Peptidoglycan biosynthesis
rii01100  Metabolic pathways
rii01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rii00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FFM53_020900
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FFM53_020900
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    FFM53_020900
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rii01011]
    FFM53_020900
Enzymes [BR:rii01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     FFM53_020900
Peptidoglycan biosynthesis and degradation proteins [BR:rii01011]
 Precursor biosynthesis
  Amino acid ligase
   FFM53_020900
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 GARS_A ATP-grasp_3 Arg_repressor CPSase_L_D2
Other DBs
NCBI-ProteinID: QKK18765
LinkDB
Position
4307687..4308613
AA seq 308 aa
MSRKHVAVLMGGFSSERPVSLSSGKACAEALEAEGFDVTRIDVARDVSEKLAALKPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKDKAKLVAGAAGIPVAESQVVNR
FAFPSTHPMKPPYVVKPVREGSSFGVVIVTEDQAHPPQIVSSPEWRYGEEVLVERYVYGR
ELTCGVMGETPLGVTEVVPQGHNFYDYDSKYAAGGSKHVIPAKISPNIYQKIQTLSLRAH
QAIGCRGVSRSDFRYDDRFSEDGEIIWLEVNTQPGMTPTSLVPEMAGHAGYSFGRFLRWM
VEDASCLR
NT seq 927 nt   +upstreamnt  +downstreamnt
atgagtcgcaagcatgtcgctgtcctgatgggcggattttcctcggaaaggcctgtcagc
ctttcctcgggaaaggcttgcgcagaagctctcgaggcagagggcttcgacgtgacgcgc
atcgacgtggcgcgcgacgtttccgagaagcttgccgcgctgaagcccgatgtcgtcttc
aatgcgcttcacggcccgttcggcgaggacggcaccattcagggcatcctcgaatatctc
gagatcccctatacgcattcgggcgtgcttgcctcggcgctggcgatggacaaggacaag
gcgaagctcgttgccggcgccgccggcattccggtggccgaatcacaggtggtcaaccgt
ttcgcctttccctcgacgcatccgatgaagccgccctatgtggtgaaacccgtccgcgaa
gggtcgagcttcggcgtcgtcatcgtcaccgaagatcaggcgcatccgccacagatcgtc
agctcgcccgaatggcgttacggtgaagaggtgctcgtcgagcgctatgtttacggtcgc
gagctgacctgcggtgtcatgggcgaaactccgcttggtgtcacggaagtggtgccgcag
ggacacaatttctatgattacgactccaagtatgcggcaggcggttcaaaacacgtcatc
cccgcgaaaatttcaccgaatatttaccaaaaaatacaaacattgtccctaagggcgcat
caggcaatcggttgtcgcggcgtcagtcggtccgactttcgttacgacgatcgtttctcc
gaagacggcgaaatcatctggctggaggtcaatacccagccagggatgactccaacctcg
ctcgtgcccgaaatggccggccatgccggctattcctttggtcggtttctccggtggatg
gtggaggacgcgtcttgtttgcgttga

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