Roseburia intestinalis M50/1: ROI_00670
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Entry
ROI_00670 CDS
T02598
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim00300
Lysine biosynthesis
rim00470
D-Amino acid metabolism
rim01100
Metabolic pathways
rim01110
Biosynthesis of secondary metabolites
rim01120
Microbial metabolism in diverse environments
rim01230
Biosynthesis of amino acids
Module
rim_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ROI_00670
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ROI_00670
Enzymes [BR:
rim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ROI_00670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CBL07426
UniProt:
D4KKM4
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All DBs
Position
57305..58588
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AA seq
427 aa
AA seq
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MKKKPFVTKEQLEEIVKKYPTPFHLYDEKGIRENAKAVKEAFSWNPGFREYFAVKATPNP
YILDILKEYDCGCDCASLTELMLADSQGFDGKHIMFSSNDTPAEEFKFANELGAIINLDD
FTHIDFLEKTIGKIPETISCRYNPGGVFKMSNGIMDNPGDAKYGFTHEQIIEGFKILKEK
GAKHFGVHAFLASNTVTNEYYPKLARQLFELVVELRDKTGCDIQFINLSGGVGVPYTPDQ
TPNDIRVIGQGVKEAFEEILVPAGLGNISIYTEMGRFMLAPYGCLVTKAIHEKHTYKEYI
GVDACAVNLMRPAIYGAYHHITVMGKEDEPCDHKYDVTGSLCENCDKFAIDRMLPKIDMG
DLLVIHDAGAHGFSMGYNYNGKLRSAEVLLKEDGSTQLIRRAETPDDYFRTFDCFDILKD
MKHPERK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaaccttttgtaaccaaagaacagctcgaagagatcgtaaaaaaatatccg
acaccgtttcatctctacgatgaaaaaggaatccgtgaaaatgcgaaggcggtcaaggaa
gcattttcctggaatcccggatttcgtgagtattttgcggtaaaggcaacgccaaacccg
tacatccttgatatcctaaaagaatatgactgcggctgcgactgtgcatccttaacagaa
ctgatgttggcagactctcagggatttgacggaaagcacatcatgttttcctcaaacgat
acacctgccgaggagtttaaatttgccaatgaacttggtgcgatcatcaacttagatgat
tttacccacattgactttttagagaaaacgatcggcaaaattcctgagacgatcagctgc
cgttataatccgggcggagtctttaagatgagcaacggcatcatggataatcctggtgat
gccaaatatggttttacacatgagcagatcatcgagggatttaagatcttaaaagaaaaa
ggtgcaaaacatttcggcgtacatgcattcttagcgagcaacaccgtgacaaatgaatat
tacccgaaactggcaagacagttgttcgaactggttgtggaactgcgtgacaagaccgga
tgtgatattcagtttatcaacctttccggcggtgtcggtgtgccttatacaccggatcag
acaccgaacgatatccgcgtgatcggacagggggtcaaggaagcttttgaggagatctta
gttccggcaggacttggaaatatctctatttatacagagatgggacgtttcatgttagca
ccttacggctgccttgtgacgaaagcaatccatgagaaacacacctataaagagtatatc
ggtgtggatgcctgtgcagtcaacctgatgcgtccggcaatttacggggcatatcatcac
atcaccgttatgggaaaagaggacgagccttgcgaccacaaatatgatgtgacaggttcc
ctctgcgagaactgtgataaatttgccattgaccgtatgctgccgaagatcgatatggga
gatctgcttgtgatccacgatgcaggagcacatggtttctccatgggatataactataac
ggaaaactgcgctccgcggaggtattgttaaaagaggatggttccacccagctgatccgc
cgtgcagagacaccggatgattacttcagaacttttgactgctttgatattttaaaggat
atgaagcatccggagagaaaataa
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