Agrobacterium pusense IRBG74: BN877_I2165
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Entry
BN877_I2165 CDS
T02867
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00470
D-Amino acid metabolism
rir00550
Peptidoglycan biosynthesis
rir01100
Metabolic pathways
rir01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN877_I2165 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN877_I2165 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BN877_I2165 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rir01011
]
BN877_I2165 (ddl)
Enzymes [BR:
rir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BN877_I2165 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rir01011
]
Precursor biosynthesis
Amino acid ligase
BN877_I2165 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
GARS_A
ATP-grasp_3
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
CDI09056
UniProt:
A0A1L9CF05
LinkDB
All DBs
Position
complement(2056647..2057573)
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AA seq
308 aa
AA seq
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MSGKHVAVLMGGFSSERPVSLSSGNACAQALEDEGYKVTRVDVGRDVAAVLDALRPDVAF
NALHGPFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVAAERVMNR
FDFTSEHPLAPPYVVKPVREGSSFGVVIVKEDQSHPPQILTSSEWKYGDHVMVERYIHGR
ELTCGVLDGEALGVTEVVPLGHNFYDYDAKYAAGGSKHVIPAEISPKIYQKIQTLAVMAH
RAIGCRGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGNLVSWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaagcacgtagctgttcttatgggtggattttcgtcggagcggccggtcagc
ctgtcgtcgggcaacgcttgcgcgcaggctctggaagacgagggctacaaggtcacccgt
gtcgatgtcggccgcgatgtcgccgccgtgcttgatgcgctgcgcccggacgtcgctttc
aacgcgctgcatgggcccttcggcgaagacggcaccattcagggcatcctcgaatatctc
gccattccctatacccattccggcgtgctcgcctcggcgcttgccatggacaaggcgcag
gccaagaaggttgctgctgctgccggcattcctgtcgccgccgagcgagtcatgaaccgc
ttcgatttcaccagcgaacatccgctggcgccgccttatgtggtgaagccggtgcgcgaa
ggctcgagcttcggcgtcgtgattgtcaaggaagatcagtcgcacccgccgcagatcctc
acgtcctctgaatggaaatacggtgaccatgtcatggtcgagcgttatatacatggccgc
gaactgacctgcggggtgctcgacggcgaggcgctgggcgtcaccgaagtggtgccgctc
ggtcacaatttctatgattacgatgcgaaatacgctgctggtggctcgaaacatgtcatt
cccgcagaaatttcaccgaaaatttaccaaaaaattcaaacactggcggttatggcgcat
cgggcgatcgggtgccgtggcgtaagccgttcagactttcgttacgacgaccgtttctca
gaagatggcgaagttatctggcttgaagtgaatacacagccgggcatgacgccgacctcc
ctggtgcctgaaatggcggcccatgctggccgctcctttggtaaccttgtcagctggatg
gtggaggacgcttcgtgtttgcggtga
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