Agrobacterium pusense IRBG74: BN877_I2721
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Entry
BN877_I2721 CDS
T02867
Symbol
sucA
Name
(GenBank) 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00020
Citrate cycle (TCA cycle)
rir00785
Lipoic acid metabolism
rir01100
Metabolic pathways
rir01110
Biosynthesis of secondary metabolites
rir01120
Microbial metabolism in diverse environments
rir01200
Carbon metabolism
rir01210
2-Oxocarboxylic acid metabolism
Module
rir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BN877_I2721 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BN877_I2721 (sucA)
Enzymes [BR:
rir01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
BN877_I2721 (sucA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
CDI09605
UniProt:
A0A1L9CPY7
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All DBs
Position
complement(2625198..2628194)
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AA seq
998 aa
AA seq
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MARQEANEQFQITSFLDGANAAYIEQLYARYEEDPSSVSPEWQSFFKALSDNPEDVKKAA
KGASWKRANWPIPANGDLVSALDGNWATVEKAIEKKVQAKAEAKSADTGKPVSEAEVLQA
TRDSVRAIMMIRAYRMRGHLHAKLDPLGIAVAVEDYNELSPKSYGFEESDYDRKIFIDNV
LGLEYATVREMIDILERTYCSTIGVEFMHMSSPEEKAWIQERIEGPDKGVAFTAEGKKAI
LSKLVEAEGYEQFLDVRFKGTKRFGLDGGESLIPALEQIIKRGGQEGLEEVVLGMAHRGR
LNVLTNVMGKPHRAVFHEFKGGSFKPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQLAKVWEGDVIPLSERAKVLPLLLHGDAAFAGQGVVAEILG
LSGLRGHRVAGTMHFIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVTY
AAKVATEYRMKFHKPVVVDMFCYRRFGHNEGDEPAFTQPKMYKVIRGHKTVARIYADRLI
AEGLLSEGEFEKMKADWRAHLEQEFEAGQSYKPNKADWLDGQWSGLRAADNADEQRRGKT
GVPMKQLKEIGKKLSTIPEGFNAHRTIQRFMENRSQMVETGEGIDWAMAEALAFGSLAVE
GHKIRLSGQDCERGTFSQRHSVLYDQETEERYIPLANLAPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERWLQMCAEDNMQVANCTTPANYFHILRRQVKRDFRKPLILMTPKSLLRHKRA
TSSLAELAGESSFHRLLWDDAEVIKDGPIKLQKDSKIRRVVMCTGKVYYDLLEEREKRGI
DDIYLLRIEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDA
KYQKVRYTGRPAAASPATGLMSKHLAQLAAFLEDALGE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcaagaagcgaacgagcagtttcagatcacgtcgtttctggacggcgcgaat
gcagcctatatcgagcagctctatgcccggtacgaagaggacccctcttccgtgtcgccg
gagtggcagagcttcttcaaggcactgtccgataatccggaagatgtgaagaaggcggcc
aagggcgcctcctggaagcgtgccaactggccgatcccggcaaatggcgatctggtttcc
gcacttgatggcaactgggccacggtcgaaaaggcgatcgaaaagaaggttcaggcaaag
gctgaggccaagagcgccgataccggcaagccggtcagcgaagccgaagtgctgcaggcg
acccgtgacagcgttcgcgccatcatgatgatccgcgcctaccgcatgcgcggccacctg
catgccaagctcgatccactcggtattgccgttgccgtcgaggactataacgagctttcg
ccgaagtcctacggctttgaagaaagcgattacgaccgcaagattttcatcgataacgtg
ctcggcctcgaatatgcgaccgtgcgcgagatgatcgatattctggagcgcacctattgc
tccactatcggcgtcgaattcatgcacatgtccagcccggaagagaaggcctggattcag
gagcgcatcgaaggtccggacaagggcgttgccttcacggccgaaggcaagaaggccatt
ctgtcaaagctggtcgaagccgaaggttatgagcagttcctcgacgtgcgtttcaagggc
accaagcgtttcggcctcgatggcggtgaatcgctgatcccggcgctcgagcagatcatc
aagcgcggcggccaggaaggtctcgaagaagtcgttctcggcatggcccaccgcggccgc
ctgaacgttctgaccaacgtcatgggcaagccgcaccgcgccgtattccacgagttcaag
ggtggttcgttcaagccagacgacgtcgaaggttcgggtgacgtgaagtatcacctcggt
gcctcctcggaccgcgagttcgacggcaacaaggttcacctgtcgctgacggccaacccg
tcgcatcttgaaatcgtcaaccctgtcgtcatgggcaaggcccgtgccaagcaggaccag
ctggccaaggtgtgggaaggcgatgtcattccgctttccgagcgcgccaaggttctgccg
ctgcttctgcacggcgatgccgcttttgcgggccagggcgtggttgctgaaattctcggc
ctttccggcctgcgcggtcaccgcgttgccggtaccatgcacttcatcatcaacaaccag
atcggctttacgacgaacccggccttctcccgttcgtcgccctatccgtccgacgtcgcc
aagatgatcgaagcgccgatcttccacgtcaacggtgacgatccggaagctgtgacctat
gcggccaaggttgccaccgaataccgcatgaagttccacaagcccgtcgtcgtggacatg
ttctgctaccgccgcttcggccacaacgaaggcgacgagccggcgttcacgcagccgaag
atgtacaaggtcatccgcggccacaagaccgtcgcgcgcatctatgccgaccgtctgatc
gccgaaggcctgctcagcgaaggcgaattcgaaaagatgaaggccgactggcgcgcccat
ctcgagcaggaattcgaggcggggcagtcctacaagccgaacaaggccgactggctggac
ggtcagtggtccggcctgcgtgccgccgacaatgcggatgagcagcgtcgcggcaagacc
ggtgtgccgatgaagcagctgaaggaaatcggcaagaaactgtcgaccattccggagggt
ttcaacgcccaccgaacgatccagcgtttcatggaaaaccgctcgcagatggtcgagacc
ggcgaaggcatcgattgggcgatggcggaagcgcttgctttcggttcgctcgccgtcgaa
ggccacaagatccgcctctccggtcaggattgcgaacgcggcaccttctcgcagcgccat
tcggttctctacgatcaggaaactgaagagcgttacatcccgctcgcaaacctcgcgccg
acgcaggcccgttacgaagtcatcaactcgatgctttcggaagaagccgtccttggtttc
gaatatggttactcgctcgcccgtccgaatgcgctgacgctctgggaagcccagttcggc
gacttcgccaacggagcacaggtggtgttcgaccagttcatctcgtcgggtgaacgcaag
tggctgcgcatgtccggtctggtctgcctgctgccgcatggttacgaaggccagggtcct
gaacattcgtccgcccgtctggagcgctggctgcagatgtgcgcggaagacaacatgcag
gttgccaactgcacgacgccggcaaactatttccacatcctgcgccgtcaggtgaagcgc
gacttccgcaagccgctgatcctgatgacgccgaagtcgctgctgcgtcacaagcgcgcc
acctcttcgctggccgagcttgcaggcgagtcctccttccaccgtctcctgtgggacgat
gctgaagtcatcaaggacggcccgatcaagctgcagaaggattcgaaaatccgccgtgtc
gtcatgtgcacgggcaaggtctattatgatctgctggaagaacgtgagaagcgcggcatc
gacgatatctatctgctgcgtatcgaacagctctatccgttcccggccaaggcgctcatc
aacgagctgtcgcgcttccgcaatgcggagatggtctggtgccaggaagagccgaagaac
atgggtgcgtggtcgtttatcgacccttacctggaatgggtcctggcgcatatcgacgcc
aagtaccagaaggtccgttacacgggccgtccggctgccgcctctccggcgaccggcctg
atgtccaagcatctggcgcagctagctgcgttcctggaagacgcgctgggagagtga
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